RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 ACDQ96AP0 544 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TMA16Q96EY4 203 aaKnown RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TBCBQ99426 244 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 NCAPGQ9BPX3 1015 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 WDCPQ9H6R7 721 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 LMAN1LQ9HAT1 526 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 MRPL47Q9HD33 250 aaKnown RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 ARHGEF4Q9NR80 690 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 PIGVQ9NUD9 493 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 DNAJC17Q9NVM6 304 aaKnown RBP11.49□□□□□ -0.57
CPSF7-212ENST00000489728 ARHGEF38Q9NXL2 777 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 TAS2R14Q9NYV8 317 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 ADAMTS1Q9UHI8 967 aa11.49□□□□□ -0.57
CPSF7-212ENST00000489728 NPC1O15118 1278 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 GPD1P21695 349 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 RRM1P23921 792 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 HOXD9P28356 352 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 RFC1P35251 1148 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 DGKGP49619 791 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 CCR3P51677 355 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 AIF1P55008 147 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 MRPS21P82921 87 aaKnown RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 MAMLD1Q13495 774 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 EIF4HQ15056 248 aaKnown RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 SLC18A3Q16572 532 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 MS4A13Q5J8X5 152 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 RABGAP1LQ5R372 815 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 NADSYN1Q6IA69 706 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 TRNP1Q6NT89 227 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 ALKBH5Q6P6C2 394 aaKnown RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 WDR59Q6PJI9 974 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 C12orf40Q86WS4 652 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 C1orf210Q8IVY1 113 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 DDI1Q8WTU0 396 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 RXFP2Q8WXD0 754 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 C1orf74Q96LT6 269 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 CFAP57Q96MR6 1250 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 HAPLN3Q96S86 360 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 PRMT1Q99873 361 aaKnown RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 CNPY3Q9BT09 278 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 PRMT8Q9NR22 394 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-212ENST00000489728 LCMT1Q9UIC8 334 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 FBXO4Q9UKT5 387 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 STARD13Q9Y3M8 1113 aa11.48□□□□□ -0.57
CPSF7-212ENST00000489728 A0A087X0T9 212 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 F5H5T6 163 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 K7EQS6 105 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 MOCS2O96007 188 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 EGFP01133 1207 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 PLEKP08567 350 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 CISD3P0C7P0 127 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 FAM228BP0C875 321 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 TACR2P21452 398 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 HOXA6P31267 233 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 SLC6A4P31645 630 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 EIF4A3P38919 411 aaKnown RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 PTPN5P54829 565 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 OXCT1P55809 520 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 NRG1Q02297 640 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ACAP1Q15027 740 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ASTE1Q2TB18 679 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ZNF528Q3MIS6 628 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 CCDC14Q49A88 953 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 C5orf22Q49AR2 442 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 DCUN1D2Q6PH85 259 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 TRMT11Q7Z4G4 463 aaKnown RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 CHSY1Q86X52 802 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 CCDC117Q8IWD4 279 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 EMC1Q8N766 993 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■■■■ 36.6
CPSF7-212ENST00000489728 JOSD2Q8TAC2 188 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 WFIKKN2Q8TEU8 576 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 NTAN1Q96AB6 310 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ZNF653Q96CK0 615 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 PRICKLE1Q96MT3 831 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 MCEEQ96PE7 176 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 PANX2Q96RD6 677 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 FAM126AQ9BYI3 521 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 ADAM33Q9BZ11 813 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 TKTL2Q9H0I9 626 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 DEF6Q9H4E7 631 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 FBRSL1Q9HCM7 1045 aaKnown RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 IMPACTQ9P2X3 320 aa11.47□□□□□ -0.57
CPSF7-212ENST00000489728 CNOT8Q9UFF9 292 aaKnown RBP11.47□□□□□ -0.57
CPSF7-212ENST00000489728 SYNJ2BP-COX16A0A087WUM0 186 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 A0A1B0GVM2 712 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 TMEM191CA6NGB0 347 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 TMCO5BA8MYB1 307 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 LAMTOR5O43504 91 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 TIMM44O43615 452 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 RNF40O75150 1001 aa11.46□□□□□ -0.57
CPSF7-212ENST00000489728 PAGE1O75459 146 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms