RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ENGP17813 658 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 FNDC3BQ53EP0 1204 aaKnown RBP11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 TRIM65Q6PJ69 517 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 SERPINA13PQ6UXR4 307 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 GBP6Q6ZN66 633 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 SCML4Q8N228 414 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 OR2I1PQ8NGU4 316 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 DQX1Q8TE96 717 aaKnown RBP11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 MYEOVQ96EZ4 313 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 SIPA1Q96FS4 1042 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 GPR174Q9BXC1 333 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC2A11Q9BYW1 496 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 ABCB8Q9NUT2 735 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 CYTH4Q9UIA0 394 aa11.76□□□□□ -0.53
NIPAL3-207ENST00000488155 SYNJ2BP-COX16A0A087WUM0 186 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 FAM170AA1A519 330 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 BECN2A8MW95 431 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 E5RJQ4 531 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 CAPN9O14815 690 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 IGLV3-27P01718 113 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 PABPC1P11940 636 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 CD70P32970 193 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC11A2P49281 568 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 NUMBP49757 651 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 LMAN2Q12907 356 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 TAF5Q15542 800 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 FAM133BQ5BKY9 247 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 SPDYCQ5MJ68 293 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 PIK3R6Q5UE93 754 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 NUGGCQ68CJ6 796 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 NADSYN1Q6IA69 706 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 TAC4Q86UU9 113 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 FAM124AQ86V42 546 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 IRF2BP1Q8IU81 584 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 PASD1Q8IV76 773 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 UNC45BQ8IWX7 931 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 CFAP52Q8N1V2 620 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 DEFB124Q8NES8 71 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 FCRL2Q96LA5 508 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 NUCKS1Q9H1E3 243 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 COX16Q9P0S2 106 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 EVLQ9UI08 416 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 XPO7Q9UIA9 1087 aaKnown RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 GGA2Q9UJY4 613 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 STOML2Q9UJZ1 356 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 AJAP1Q9UKB5 411 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 CNTN6Q9UQ52 1028 aa11.75□□□□□ -0.53
NIPAL3-207ENST00000488155 KNTC1P50748 2209 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 MEI4A8MW99 385 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 NPC1O15118 1278 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PAPSS1O43252 624 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 MED7O43513 233 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 LATS1O95835 1130 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PNMA6AP0CW24 399 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PON1P27169 355 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 CD6P30203 668 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 ACADSBP45954 432 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 COPAP53621 1224 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 ATXN3P54252 364 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 RPS24P62847 133 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PITX1P78337 314 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 ENPP2Q13822 863 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 EIF4HQ15056 248 aaKnown RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 EXOC3L4Q17RC7 722 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 MBLAC2Q68D91 279 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 ADIPOR2Q86V24 386 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 CARNMT1Q8N4J0 409 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 WFIKKN2Q8TEU8 576 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 ZNF419Q96HQ0 510 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 SERPINB11Q96P15 392 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC4A5Q9BY07 1137 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 MIR1-1HGQ9H1L0 117 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 CLSTN2Q9H4D0 955 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 MTG2Q9H4K7 406 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 ITM2CQ9NQX7 267 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 WSB2Q9NYS7 404 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PLA2G4CQ9UP65 541 aa11.74□□□□□ -0.53
NIPAL3-207ENST00000488155 PES1O00541 588 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 TIMM44O43615 452 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 GRAP2O75791 330 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 ACADMP11310 421 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 POLR2EP19388 210 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 RPL34P49207 117 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 TPMTP51580 245 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 ZNF445P59923 1031 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 GFPT1Q06210 699 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 ZNF252P-AS1Q0IIN9 211 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 FOXC1Q12948 553 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 PDCLQ13371 301 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 PLEKHG6Q3KR16 790 aa11.73□□□□□ -0.53
NIPAL3-207ENST00000488155 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms