RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CHMP4BQ9H444 224 aaKnown RBP4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 KLC4Q9NSK0 619 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 ZBTB40Q9NUA8 1239 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 FBXO28Q9NVF7 368 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 NYAP2Q9P242 653 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 DDX19BQ9UMR2 479 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 CNPY2Q9Y2B0 182 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 WNT6Q9Y6F9 365 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 SLC4A4Q9Y6R1 1079 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 ELP1O95163 1332 aa4.67□□□□□ -1.66
SNRNP40-205ENST00000486941 PROB1E7EW31 1015 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 F5H6K3 240 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 SMIM22K7EJ46 135 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 TOR1BO14657 336 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 PQBP1O60828 265 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 DUSP11O75319 330 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 SNAI1O95863 264 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 TIMP1P01033 207 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 CST5P28325 142 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 CDK7P50613 346 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 KLRC3Q07444 240 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 EIF2B5Q13144 721 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 HLXQ14774 488 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 TMEM119Q4V9L6 283 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 FAM83BQ5T0W9 1011 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 RNF219Q5W0B1 726 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 SNRNP48Q6IEG0 339 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 CCSAPQ6IQ19 270 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 CCDC174Q6PII3 467 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 SLC30A10Q6XR72 485 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 RSPH3Q86UC2 560 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 PCSK9Q8NBP7 692 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 C1orf162Q8NEQ5 155 aaPredicted RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 SEMA6DQ8NFY4 1073 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 GLT1D1Q96MS3 346 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 STRBPQ96SI9 672 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 AMBRA1Q9C0C7 1298 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 PUS7LQ9H0K6 701 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 UPF3AQ9H1J1 476 aaKnown RBP4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 ABHD16BQ9H3Z7 469 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 STARD7Q9NQZ5 370 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 ETAA1Q9NY74 926 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 FBXO40Q9UH90 709 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 TBX21Q9UL17 535 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 AGAP1Q9UPQ3 857 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 MROH7Q68CQ1 1323 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 SYNRGQ9UMZ2 1314 aa4.66□□□□□ -1.66
SNRNP40-205ENST00000486941 BDP1A6H8Y1 2624 aa4.65□□□□□ -1.66
SNRNP40-205ENST00000486941 GBF1Q92538 1859 aa4.65□□□□□ -1.66
SNRNP40-205ENST00000486941 IGKV6D-41A0A0C4DH26 115 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 CCDC154A6NI56 674 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 NT5C1B-RDH14C9J2C7 533 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ZBED4O75132 1171 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 NDUFB10O96000 172 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ASGR1P07306 291 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 DRD4P21917 467 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 NPTX2P47972 431 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 OAZ1P54368 228 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 DSC2Q02487 901 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 PPIGQ13427 754 aaKnown RBP eCLIP4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ACVR2BQ13705 512 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 MTX3Q5HYI7 312 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 CT47A1Q5JQC4 288 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 TMEM240Q5SV17 173 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ZNF626Q68DY1 528 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 SDE2Q6IQ49 451 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 TMEM199Q8N511 208 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 CNTD1Q8N815 330 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 TIFAQ96CG3 184 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 REPS1Q96D71 796 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 CLPTM1LQ96KA5 538 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 TRIB1Q96RU8 372 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 NUP88Q99567 741 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 PACSIN1Q9BY11 444 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 SEZ6LQ9BYH1 1024 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 LRRCC1Q9C099 1032 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 SPC25Q9HBM1 224 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 SLC38A10Q9HBR0 1119 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ZNF287Q9HBT7 754 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ECHDC1Q9NTX5 307 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 CLIP2Q9UDT6 1046 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 FEM1BQ9UK73 627 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 ZHX1Q9UKY1 873 aaPredicted RBP4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 NEU2Q9Y3R4 380 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 RIPK3Q9Y572 518 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 PRUNE2Q8WUY3 3088 aa4.65□□□□□ -1.67
SNRNP40-205ENST00000486941 PRRC2BQ5JSZ5 2229 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 A0A0U1RQG5 324 aaPredicted RBP4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 LINC01548A6NM66 108 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 E7ENX8 843 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 F2RL2O00254 374 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 ZNF213O14771 459 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 CTAGE5O15320 804 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 RNF113AO15541 343 aaKnown RBP4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 SGTAO43765 313 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 CABYRO75952 493 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 TTLL1O95922 423 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 CD4P01730 458 aa4.64□□□□□ -1.67
SNRNP40-205ENST00000486941 ZFYP08048 801 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms