RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 TAC4Q86UU9 113 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 CAND1Q86VP6 1230 aaKnown RBP12.34□□□□□ -0.43
PKP4-213ENST00000486254 ZNF280BQ86YH2 543 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 KLHDC8BQ8IXV7 354 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 LZTR1Q8N653 840 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 CCDC110Q8TBZ0 833 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 ZNF296Q8WUU4 475 aaPredicted RBP12.34□□□□□ -0.43
PKP4-213ENST00000486254 FAM193BQ96PV7 902 aaPredicted RBP12.34□□□□□ -0.43
PKP4-213ENST00000486254 WDCPQ9H6R7 721 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 PPANQ9NQ55 473 aaKnown RBP12.34□□□□□ -0.43
PKP4-213ENST00000486254 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 SCML2Q9UQR0 700 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 MYO16Q9Y6X6 1858 aa12.34□□□□□ -0.43
PKP4-213ENST00000486254 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 FGF10O15520 208 aaPredicted RBP12.33□□□□□ -0.44
PKP4-213ENST00000486254 B4GALT3O60512 393 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 NBNO60934 754 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 CXCL10P02778 98 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 APRTP07741 180 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 ERCC2P18074 760 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 DRD4P21917 467 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 FGFR3P22607 806 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 YY1P25490 414 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 VEGFBP49765 207 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 SEC24CP53992 1094 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 YWHAGP61981 247 aaKnown RBP eCLIP12.33□□□□□ -0.44
PKP4-213ENST00000486254 GAD2Q05329 585 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 TMED2Q15363 201 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 PAN2Q504Q3 1202 aaKnown RBP12.33□□□□□ -0.44
PKP4-213ENST00000486254 MANEALQ5VSG8 457 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 GKAP1Q5VSY0 366 aaPredicted RBP12.33□□□□□ -0.44
PKP4-213ENST00000486254 ARMC3Q5W041 872 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 STEAP4Q687X5 459 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 ZNF280DQ6N043 979 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 ZNF534Q76KX8 674 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 MON1AQ86VX9 555 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 LRRC49Q8IUZ0 686 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 MDM1Q8TC05 714 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 C2orf15Q8WU43 125 aaKnown RBP12.33□□□□□ -0.44
PKP4-213ENST00000486254 SLC44A1Q8WWI5 657 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 CKAP2Q8WWK9 683 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 PAFAH2Q99487 392 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 ADAM28Q9UKQ2 775 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 TRHDEQ9UKU6 1024 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
PKP4-213ENST00000486254 ZNF638Q14966 1978 aaKnown RBP12.32□□□□□ -0.44
PKP4-213ENST00000486254 I6L893 689 aaPredicted RBP12.32□□□□□ -0.44
PKP4-213ENST00000486254 RNF103O00237 685 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 ENPP3O14638 875 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 CREB3O43889 395 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 C1QAP02745 245 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 SLC2A3P11169 496 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 DNAJB2P25686 324 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 SSTR1P30872 391 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 MSH2P43246 934 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 PSEN1P49768 467 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 COG7P83436 770 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 WASHC5Q12768 1159 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 NAB1Q13506 487 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 FRG1Q14331 258 aaKnown RBP12.32□□□□□ -0.44
PKP4-213ENST00000486254 GPNMBQ14956 572 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 ANKRD33Q7Z3H0 272 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 ANKMY2Q8IV38 441 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 SRRM1Q8IYB3 904 aaKnown RBP12.32□□□□□ -0.44
PKP4-213ENST00000486254 DENND1AQ8TEH3 1009 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 FBF1Q8TES7 1133 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 HASPINQ8TF76 798 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 MZB1Q8WU39 189 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 DCAKDQ8WVC6 231 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 DPF3Q92784 378 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 SIGLEC10Q96LC7 697 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 MAGEB18Q96M61 343 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 SERPINB11Q96P15 392 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 TSGA13Q96PP4 275 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 PPP1R2P1Q96PQ5 205 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 SMC6Q96SB8 1091 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 TRABDQ9H4I3 376 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 PRDM12Q9H4Q4 367 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 OR12D3Q9UGF7 316 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 RSPH14Q9UHP6 348 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 CHMP2BQ9UQN3 213 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 PCDHB7Q9Y5E2 793 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
PKP4-213ENST00000486254 IQANK1A0A1B0GTG1 560 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 AP3B1O00203 1094 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 TM9SF1O15321 606 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 TYROBPO43914 113 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 SUN1O94901 812 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 ZWINTO95229 277 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 METTL18O95568 372 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 CCR1P32246 355 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 NRLP54845 237 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 ITIH4Q14624 930 aa12.31□□□□□ -0.44
PKP4-213ENST00000486254 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
PKP4-213ENST00000486254 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms