RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 LHX5Q9H2C1 402 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 FAM207AQ9NSI2 230 aaPredicted RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 XPO7Q9UIA9 1087 aaKnown RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 PCDHGC3Q9UN70 934 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 CYP8B1Q9UNU6 501 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 TYW5A2RUC4 315 aaKnown RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 CAVIN2O95810 425 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 ERBB2P04626 1255 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 CYP11B1P15538 503 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 NDUFV2P19404 249 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 KCNA4P22459 653 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 HLA-FP30511 346 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 P2RY2P41231 377 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 ZNF445P59923 1031 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 POLR2FP61218 127 aaKnown RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 CDK17Q00537 523 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 RING1Q06587 406 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 NME3Q13232 169 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 ZNF234Q14588 700 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 MAP7D1Q3KQU3 841 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 FAM133BQ5BKY9 247 aaKnown RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 CDKAL1Q5VV42 579 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 RAP1GAP2Q684P5 730 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 TMEM215Q68D42 235 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 LPCAT2Q7L5N7 544 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 C11orf74Q86VG3 221 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 CCDC117Q8IWD4 279 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 ANKRD20A12PQ8NF67 263 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 NUCKS1Q9H1E3 243 aaKnown RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 NLRC4Q9NPP4 1024 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 THAP10Q9P2Z0 257 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 MBD1Q9UIS9 605 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-204ENST00000486023 GGA2Q9UJY4 613 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 STOML2Q9UJZ1 356 aa18.33■□□□□ 0.52
COL6A1-204ENST00000486023 DCDC2BA2VCK2 349 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 GFPT2O94808 682 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 EPHX1P07099 455 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 ZNF806P0C7X5 589 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 HLA-EP13747 358 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 NUMBP49757 651 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
COL6A1-204ENST00000486023 ATXN1P54253 815 aaKnown RBP18.32■□□□□ 0.52
COL6A1-204ENST00000486023 SNX16P57768 344 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 RPS24P62847 133 aaKnown RBP18.32■□□□□ 0.52
COL6A1-204ENST00000486023 MYL5Q02045 173 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 RPL6Q02878 288 aaKnown RBP18.32■□□□□ 0.52
COL6A1-204ENST00000486023 PTPN20Q4JDL3 420 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 FNDC3BQ53EP0 1204 aaKnown RBP18.32■□□□□ 0.52
COL6A1-204ENST00000486023 C2CD6Q53TS8 623 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 PMS2CLQ68D20 193 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 SERPINA13PQ6UXR4 307 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 CYP2U1Q7Z449 544 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 CHSY1Q86X52 802 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 MFN1Q8IWA4 741 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 LGI2Q8N0V4 545 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 TMEM35BQ8NCS4 154 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 MYEOVQ96EZ4 313 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 SLC39A13Q96H72 371 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 STK33Q9BYT3 514 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 RXFP3Q9NSD7 469 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 DDIT4Q9NX09 232 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 SLC12A6Q9UHW9 1150 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 PLA2G4CQ9UP65 541 aa18.32■□□□□ 0.52
COL6A1-204ENST00000486023 GFRA2O00451 464 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 IRAK2O43187 625 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 TIMM44O43615 452 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 HSF2BPO75031 334 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 PABPC1P11940 636 aaKnown RBP18.31■□□□□ 0.52
COL6A1-204ENST00000486023 SDHBP21912 280 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 CD70P32970 193 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 PTGER3P43115 390 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 SLC6A3Q01959 620 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 TYRO3Q06418 890 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 FUT11Q495W5 492 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 MS4A13Q5J8X5 152 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 NOP9Q86U38 636 aaKnown RBP18.31■□□□□ 0.52
COL6A1-204ENST00000486023 ERICH1Q86X53 443 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 AOPEPQ8N6M6 819 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 HJURPQ8NCD3 748 aaPredicted RBP18.31■□□□□ 0.52
COL6A1-204ENST00000486023 WFDC5Q8TCV5 224 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 AZIN2Q96A70 460 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 MRGPRX1Q96LB2 322 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 NAA15Q9BXJ9 866 aaKnown RBP18.31■□□□□ 0.52
COL6A1-204ENST00000486023 CD93Q9NPY3 652 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 VPS45Q9NRW7 570 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 DLL3Q9NYJ7 618 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 PCDHGA5Q9Y5G8 931 aa18.31■□□□□ 0.52
COL6A1-204ENST00000486023 ATXN2Q99700 1313 aaKnown RBP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 BCLAF3A2AJT9 711 aaKnown RBP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 F8VZ95 297 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 H0Y626 953 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 POLR2EP19388 210 aaKnown RBP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 PRKCHP24723 683 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 UBXN1Q04323 297 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 CDH18Q13634 790 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 EIF4HQ15056 248 aaKnown RBP18.3■□□□□ 0.52
COL6A1-204ENST00000486023 SYCP1Q15431 976 aa18.3■□□□□ 0.52
COL6A1-204ENST00000486023 MBLAC2Q68D91 279 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms