RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SYNJ2BP-COX16A0A087WUM0 186 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 DRGXA6NNA5 263 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 FAM72CH0Y354 149 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 SPOPO43791 374 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 ECI2O75521 394 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 HMBSP08397 361 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 HCAR3P49019 387 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 HARS2P49590 506 aaKnown RBP16.4■□□□□ 0.22
APOE-205ENST00000485628 TFF2Q03403 129 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 HTR4Q13639 388 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 KCNT1Q5JUK3 1230 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 ADGRF1Q5T601 910 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 FAM72AQ5TYM5 149 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 DCAF12L1Q5VU92 463 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
APOE-205ENST00000485628 FAM72DQ6L9T8 149 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 SCYL2Q6P3W7 929 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 PARM1Q6UWI2 310 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 ANKS1BQ7Z6G8 1248 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 FAM72BQ86X60 149 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 CPXM2Q8N436 756 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 FGF14Q92915 247 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 FAF2Q96CS3 445 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 PLA2G2FQ9BZM2 168 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 COX16Q9P0S2 106 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 PACSIN2Q9UNF0 486 aaPredicted RBP16.4■□□□□ 0.22
APOE-205ENST00000485628 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
APOE-205ENST00000485628 HEPACAM2A8MVW5 462 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 C2CD4DB7Z1M9 353 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 LOC730098B7Z3J9 87 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
APOE-205ENST00000485628 APOEP02649 317 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 SLC6A4P31645 630 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 ARL13BQ3SXY8 428 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 PAPD7Q5XG87 772 aaKnown RBP16.39■□□□□ 0.21
APOE-205ENST00000485628 VITQ6UXI7 678 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 DENND1CQ8IV53 801 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 MFSD6LQ8IWD5 586 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 BBS7Q8IWZ6 715 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 ADGRG2Q8IZP9 1017 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 PYROXD2Q8N2H3 581 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 BPIFB1Q8TDL5 484 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 RAPGEF5Q92565 580 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 OTUB2Q96DC9 234 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 MYEOVQ96EZ4 313 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 KCTD15Q96SI1 283 aaPredicted RBP16.39■□□□□ 0.21
APOE-205ENST00000485628 FAM83CQ9BQN1 747 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 RPP25Q9BUL9 199 aaKnown RBP16.39■□□□□ 0.21
APOE-205ENST00000485628 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 ZNF212Q9UDV6 495 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 OR12D3Q9UGF7 316 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
APOE-205ENST00000485628 MYO10Q9HD67 2058 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 ARNTLO00327 626 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 TUBB4AP04350 444 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 IRF1P10914 325 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 PRLRP16471 622 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 KDELR1P24390 212 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 GBP2P32456 591 aaPredicted RBP16.38■□□□□ 0.21
APOE-205ENST00000485628 HTR7P34969 479 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 PTPN7P35236 360 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 SLC11A2P49281 568 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 ZNF135P52742 658 aaPredicted RBP16.38■□□□□ 0.21
APOE-205ENST00000485628 GNG11P61952 73 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 AUHQ13825 339 aaKnown RBP16.38■□□□□ 0.21
APOE-205ENST00000485628 PDK2Q15119 407 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 SMTNL2Q2TAL5 461 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 FBXL22Q6P050 247 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 C14orf80Q86SX3 495 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 PLCD3Q8N3E9 789 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 EXD1Q8NHP7 514 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 RNF34Q969K3 372 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 NXPE3Q969Y0 559 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 ASIC4Q96FT7 647 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 ZWILCHQ9H900 591 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 PCDH18Q9HCL0 1135 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 DDX56Q9NY93 547 aaKnown RBP16.38■□□□□ 0.21
APOE-205ENST00000485628 RCOR3Q9P2K3 495 aaPredicted RBP16.38■□□□□ 0.21
APOE-205ENST00000485628 TBC1D14Q9P2M4 693 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 PPARGC1AQ9UBK2 798 aaKnown RBP16.38■□□□□ 0.21
APOE-205ENST00000485628 SLC12A6Q9UHW9 1150 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 CHD5Q8TDI0 1954 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 MYOFQ9NZM1 2061 aa16.38■□□□□ 0.21
APOE-205ENST00000485628 GOLGA6L7A0A1B0GV03 622 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 WASH4PA8MWX3 477 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 ESPNB1AK53 854 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 LRIG2O94898 1065 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 ATP1A1P05023 1023 aaKnown RBP16.37■□□□□ 0.21
APOE-205ENST00000485628 CD48P09326 243 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 IL9P15248 144 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 TACR2P21452 398 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 COPS2P61201 443 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 AMPD2Q01433 879 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 DPYSL3Q14195 570 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 RPS6KA1Q15418 735 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 EFHC2Q5JST6 749 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 MTSS1LQ765P7 747 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 RCOR2Q8IZ40 523 aa16.37■□□□□ 0.21
APOE-205ENST00000485628 OSCP1Q8WVF1 389 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms