RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 APOEP02649 317 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 GABRG2P18507 467 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 HLA-FP30511 346 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 IL12RB1P42701 662 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 RNASE9P60153 205 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 RPS24P62847 133 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 SLC6A3Q01959 620 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 USP39Q53GS9 565 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 EFHC1Q5JVL4 640 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 PIK3R6Q5UE93 754 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 RAP1GAP2Q684P5 730 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 TMEM215Q68D42 235 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 SDE2Q6IQ49 451 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 CHSY1Q86X52 802 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 CFAP52Q8N1V2 620 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 TMEM35BQ8NCS4 154 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 KCNV2Q8TDN2 545 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 DDX1Q92499 740 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 SLC2A13Q96QE2 648 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 SPAG5Q96R06 1193 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 GABRG3Q99928 467 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 TRIM62Q9BVG3 475 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 SMOC1Q9H4F8 434 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 ABCB8Q9NUT2 735 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 DDIT4Q9NX09 232 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.75□□□□□ -0.37
MSH5-216ENST00000484309 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
MSH5-216ENST00000484309 NUMA1Q14980 2115 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 SYCE3A1L190 88 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 GOLGA8SH3BPF8 625 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 EPN2O95208 641 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 IGLV3-25P01717 112 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 TGM1P22735 817 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CD70P32970 193 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 SOX5P35711 763 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 NUMBP49757 651 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 JAM2P57087 298 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ZNF445P59923 1031 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CDK17Q00537 523 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ARID5AQ03989 594 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 NME3Q13232 169 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
MSH5-216ENST00000484309 NNTQ13423 1086 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ZNF234Q14588 700 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ELF2Q15723 593 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 NAA35Q5VZE5 725 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CHST9Q7L1S5 443 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 BEND5Q7L4P6 421 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ARMCX6Q7L4S7 300 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ERICH1Q86X53 443 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CACUL1Q86Y37 369 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 LGI2Q8N0V4 545 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CARNMT1Q8N4J0 409 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ZNF366Q8N895 744 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 HJURPQ8NCD3 748 aaPredicted RBP12.74□□□□□ -0.37
MSH5-216ENST00000484309 OLIG1Q8TAK6 271 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CYB5D2Q8WUJ1 264 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 UCMAQ8WVF2 138 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CPA5Q8WXQ8 436 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 RNF34Q969K3 372 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 SLC2A11Q9BYW1 496 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 NAT10Q9H0A0 1025 aaKnown RBP12.74□□□□□ -0.37
MSH5-216ENST00000484309 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 SEMA4GQ9NTN9 838 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ASNSD1Q9NWL6 643 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 ELOVL2Q9NXB9 296 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 CALCOCO1Q9P1Z2 691 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 THAP10Q9P2Z0 257 aaPredicted RBP12.74□□□□□ -0.37
MSH5-216ENST00000484309 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
MSH5-216ENST00000484309 NOCTQ9UK39 431 aaKnown RBP12.74□□□□□ -0.37
MSH5-216ENST00000484309 TYW5A2RUC4 315 aaKnown RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 TEX33O43247 280 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 GLI1P08151 1106 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 HLA-EP13747 358 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 CHRNB2P17787 502 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 NDUFV2P19404 249 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 TFE3P19532 575 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 TACR2P21452 398 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 PRKCHP24723 683 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 CDH5P33151 784 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 GGCXP38435 758 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 P2RY2P41231 377 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 STAT1P42224 750 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 DHPSP49366 369 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 SULT1E1P49888 294 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 SNX16P57768 344 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 NOMO3P69849 1222 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 FMO1Q01740 532 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 CREB5Q02930 508 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 SF3A2Q15428 464 aaKnown RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 MS4A13Q5J8X5 152 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 OTUD1Q5VV17 481 aaPredicted RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 KIAA1324Q6UXG2 1013 aaKnown RBP12.73□□□□□ -0.37
MSH5-216ENST00000484309 SLC26A9Q7LBE3 791 aa12.73□□□□□ -0.37
MSH5-216ENST00000484309 PHLDB2Q86SQ0 1253 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms