RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CDH5P33151 784 aaPredicted RBP14.41□□□□□ -0.1
VARS-225ENST00000482996 POLR2FP61218 127 aaKnown RBP14.41□□□□□ -0.1
VARS-225ENST00000482996 SLC6A3Q01959 620 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 TAF5Q15542 800 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 PTPN20Q4JDL3 420 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 ZC3H12AQ5D1E8 599 aaKnown RBP14.41□□□□□ -0.1
VARS-225ENST00000482996 TAF3Q5VWG9 929 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
VARS-225ENST00000482996 FAM183BPQ6ZVS7 135 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 DEFB106AQ8N104 65 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 AOPEPQ8N6M6 819 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 ATP6V0D2Q8N8Y2 350 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 NEK11Q8NG66 645 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 RNF34Q969K3 372 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 SLC2A13Q96QE2 648 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 SPAG5Q96R06 1193 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.41□□□□□ -0.1
VARS-225ENST00000482996 STON1Q9Y6Q2 735 aa14.41□□□□□ -0.1
VARS-225ENST00000482996 EML5Q05BV3 1969 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 SYNCRIPO60506 623 aaKnown RBP14.4□□□□□ -0.1
VARS-225ENST00000482996 DAB1O75553 588 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 GRAP2O75791 330 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 IGLV3-25P01717 112 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 PABPC1P11940 636 aaKnown RBP14.4□□□□□ -0.1
VARS-225ENST00000482996 ZNF18P17022 549 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 GABRG2P18507 467 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 SLC6A4P31645 630 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 P2RY2P41231 377 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 KLK7P49862 253 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 UBXN1Q04323 297 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 SYCP1Q15431 976 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 ANO6Q4KMQ2 910 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 PMS2CLQ68D20 193 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 NADSYN1Q6IA69 706 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 OLFML1Q6UWY5 402 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 PRR23CQ6ZRP0 262 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 CHST9Q7L1S5 443 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 SLC26A9Q7LBE3 791 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 NOP9Q86U38 636 aaKnown RBP14.4□□□□□ -0.1
VARS-225ENST00000482996 CHSY1Q86X52 802 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 ERICH1Q86X53 443 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 ZNF677Q86XU0 584 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 MFN1Q8IWA4 741 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 ABCA7Q8IZY2 2146 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.4□□□□□ -0.1
VARS-225ENST00000482996 ZNF397Q8NF99 534 aaPredicted RBP14.4□□□□□ -0.1
VARS-225ENST00000482996 RLN3Q8WXF3 142 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 C18orf8Q96DM3 657 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 BTN2A3PQ96KV6 586 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 NLRC4Q9NPP4 1024 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 ABCB8Q9NUT2 735 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 DDIT4Q9NX09 232 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 RRN3Q9NYV6 651 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 STIM2Q9P246 746 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 GGA2Q9UJY4 613 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 PLA2G4CQ9UP65 541 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 SIK3Q9Y2K2 1263 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 RAD54BQ9Y620 910 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 RALGAPA1Q6GYQ0 2036 aa14.4□□□□□ -0.1
VARS-225ENST00000482996 SYNJ2BP-COX16A0A087WUM0 186 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 LRRC10BA6NIK2 292 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 SMTNL1A8MU46 457 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 WASH3PC4AMC7 463 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 ZNF217O75362 1048 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 GFPT2O94808 682 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 ABCB4P21439 1286 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 BCKDHBP21953 392 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 HLA-FP30511 346 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 CCR1P32246 355 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 NOS2P35228 1153 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 SOX5P35711 763 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 MPLP40238 635 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 STAT1P42224 750 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 IL12RB1P42701 662 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 SGSHP51688 502 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
VARS-225ENST00000482996 CREB5Q02930 508 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 MTA1Q13330 715 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 ZNF234Q14588 700 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 PUM1Q14671 1186 aaKnown RBP eCLIP14.39□□□□□ -0.11
VARS-225ENST00000482996 NCAPHQ15003 741 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 RSPO4Q2I0M5 234 aaPredicted RBP14.39□□□□□ -0.11
VARS-225ENST00000482996 MAP7D1Q3KQU3 841 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 MS4A13Q5J8X5 152 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 RNF43Q68DV7 783 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 KIAA1211LQ6NV74 962 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 SERPINA13PQ6UXR4 307 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 LPCAT2Q7L5N7 544 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 AHI1Q8N157 1196 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 C12orf50Q8NA57 414 aaPredicted RBP14.39□□□□□ -0.11
VARS-225ENST00000482996 EPS8L1Q8TE68 723 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 DDX1Q92499 740 aaKnown RBP14.39□□□□□ -0.11
VARS-225ENST00000482996 RMDN1Q96DB5 314 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 BPIFA3Q9BQP9 254 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 NUCKS1Q9H1E3 243 aaKnown RBP14.39□□□□□ -0.11
VARS-225ENST00000482996 VPS45Q9NRW7 570 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 COX16Q9P0S2 106 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 CALCOCO1Q9P1Z2 691 aa14.39□□□□□ -0.11
VARS-225ENST00000482996 CDV3Q9UKY7 258 aaKnown RBP14.39□□□□□ -0.11
VARS-225ENST00000482996 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms