RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 RPLP0P6Q8NHW5 317 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 RXFP2Q8WXD0 754 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 BTN2A3PQ96KV6 586 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 PRICKLE1Q96MT3 831 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-215ENST00000478531 PNKPQ96T60 521 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 NPY6RQ99463 290 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 OSBPL6Q9BZF3 934 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 ZDHHC4Q9NPG8 344 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 RRN3Q9NYV6 651 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 MARK1Q9P0L2 795 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 STIM2Q9P246 746 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 MYO1AQ9UBC5 1043 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 SLC12A6Q9UHW9 1150 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 A0A087X0T9 212 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 TBC1D3BA6NDS4 549 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 ANTXRLA6NF34 631 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 C2CD4BA6NLJ0 364 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 KCNU1A8MYU2 1149 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 AKR1B15C9JRZ8 316 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 GALR2O43603 387 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 TBL1XO60907 577 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 RTN2O75298 545 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 ADCY5O95622 1261 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 PENKP01210 267 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 FAM228BP0C875 321 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 GZMAP12544 262 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 GPD1P21695 349 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 HOXD9P28356 352 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 RDXP35241 583 aaKnown RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 RFC1P35251 1148 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 EIF2DP41214 584 aaKnown RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 GSCP56915 257 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 RPL7AP62424 266 aaKnown RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC14Q49A88 953 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 MPPE1Q53F39 396 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 RAB6CQ53S08 254 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 C2orf27AQ580R0 203 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 C10orf76Q5T2E6 689 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 SH3PXD2AQ5TCZ1 1133 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 PIK3R6Q5UE93 754 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 PPP1R2P3Q6NXS1 205 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 PKN3Q6P5Z2 889 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 WDR59Q6PJI9 974 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CIR1Q86X95 450 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 FAM131BQ86XD5 332 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 ETFBKMTQ8IXQ9 262 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 FAM217AQ8IXS0 508 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 DRC7Q8IY82 874 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 LGI2Q8N0V4 545 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CFAP52Q8N1V2 620 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 TERB1Q8NA31 727 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 FAM172AQ8WUF8 416 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 EZH1Q92800 747 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CLDN23Q96B33 292 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 TMA16Q96EY4 203 aaKnown RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 MYEOVQ96EZ4 313 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 MRFAP1L1Q96HT8 127 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 DDX50Q9BQ39 737 aaKnown RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 TKTL2Q9H0I9 626 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 SIK2Q9H0K1 926 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 RAB6CQ9H0N0 254 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CHRDQ9H2X0 955 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 WDCPQ9H6R7 721 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 TMPRSS4Q9NRS4 437 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CNOT8Q9UFF9 292 aaKnown RBP7.15□□□□□ -1.27
BRCA1-215ENST00000478531 CLEC4EQ9ULY5 219 aa7.15□□□□□ -1.27
BRCA1-215ENST00000478531 ZNF292O60281 2723 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 SIGLEC16A6NMB1 481 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 F5H5T6 163 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 K7EQS6 105 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 CCP110O43303 1012 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 LAMTOR5O43504 91 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 PAGE1O75459 146 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 F9P00740 461 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 TACR2P21452 398 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 HNRNPH3P31942 346 aaKnown RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 TIE1P35590 1138 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 GRIA2P42262 883 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 MAGEA9P43362 315 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 NUMBP49757 651 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 RPS24P62847 133 aaKnown RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 GFPT1Q06210 699 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 TBX2Q13207 712 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 EIF4EBP2Q13542 120 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 GAS6Q14393 721 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 PPP2R5DQ14738 602 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 ANGPT1Q15389 498 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 PREPLQ4J6C6 727 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 MS4A13Q5J8X5 152 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 CCDC122Q5T0U0 273 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 ARCQ7LC44 396 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 C1orf210Q8IVY1 113 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 CARNMT1Q8N4J0 409 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 HJURPQ8NCD3 748 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-215ENST00000478531 PRSS33Q8NF86 280 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 NT5C3BQ969T7 300 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 ERLEC1Q96DZ1 483 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 TRIM11Q96F44 468 aa7.14□□□□□ -1.27
BRCA1-215ENST00000478531 PARVAQ9NVD7 372 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms