RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 TMEM215Q68D42 235 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 PRR23CQ6ZRP0 262 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 ARMCX6Q7L4S7 300 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 C11orf74Q86VG3 221 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 AOPEPQ8N6M6 819 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 NEK11Q8NG66 645 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 OLIG1Q8TAK6 271 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 FAM149B1Q96BN6 582 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 ZC3H10Q96K80 434 aaKnown RBP14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 FUCA2Q9BTY2 467 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 PDCL3Q9H2J4 239 aa14.36□□□□□ -0.11
SOX2-OT-208ENST00000477928 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 DCDC2BA2VCK2 349 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLC2A3P11169 496 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 HOXD9P28356 352 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 NTSR1P30989 418 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 SOX5P35711 763 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 MPLP40238 635 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 STAT1P42224 750 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 KLK7P49862 253 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 TBX4P57082 545 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 TPM4P67936 248 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 EIF4HQ15056 248 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 MAP7D1Q3KQU3 841 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 FAM133BQ5BKY9 247 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 TRIM72Q6ZMU5 477 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLC26A9Q7LBE3 791 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 ARCQ7LC44 396 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 APTXQ7Z2E3 356 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 CHPFQ8IZ52 775 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 DEFB119Q8N690 84 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 GPR161Q8N6U8 529 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 DDI1Q8WTU0 396 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 DDX1Q92499 740 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLC39A13Q96H72 371 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 PRICKLE1Q96MT3 831 aaPredicted RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLC2A13Q96QE2 648 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 CPXM1Q96SM3 734 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 BCCIPQ9P287 314 aaKnown RBP eCLIP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 ATXN2Q99700 1313 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-208ENST00000477928 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 TYW5A2RUC4 315 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 PATE3B3GLJ2 98 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 TIMM44O43615 452 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 IGLV3-25P01717 112 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 NDUFV2P19404 249 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 P2RY2P41231 377 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 IL12RB1P42701 662 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 PTGER3P43115 390 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 NUMBP49757 651 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 CDK17Q00537 523 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLC6A3Q01959 620 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 CREB5Q02930 508 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 LMNB2Q03252 620 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 EIF4EBP2Q13542 120 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 SYCP1Q15431 976 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 CSRP2Q16527 193 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 USP39Q53GS9 565 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 PMS2CLQ68D20 193 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 RNF43Q68DV7 783 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 CACUL1Q86Y37 369 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 TMEFF1Q8IYR6 380 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 PGBD3Q8N328 593 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 ZNF366Q8N895 744 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 UCMAQ8WVF2 138 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 SYNCQ9H7C4 482 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 POLMQ9NP87 494 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 FAM207AQ9NSI2 230 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 SLC12A6Q9UHW9 1150 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 SPAG17Q6Q759 2223 aa14.34□□□□□ -0.11
SOX2-OT-208ENST00000477928 EML5Q05BV3 1969 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 ACSL4O60488 711 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 GRAP2O75791 330 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 MOCS2O96007 188 aaPredicted RBP14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 APOEP02649 317 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 ERBB2P04626 1255 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 PRKCHP24723 683 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 HLA-FP30511 346 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 NOS2P35228 1153 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 CDR2Q01850 454 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 PTPN20Q4JDL3 420 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 PLA2G2CQ5R387 149 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 SDE2Q6IQ49 451 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 PPP1R2P3Q6NXS1 205 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 OLFML1Q6UWY5 402 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 DGLUCYQ7Z3D6 616 aa14.33□□□□□ -0.12
SOX2-OT-208ENST00000477928 ANKS1BQ7Z6G8 1248 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms