RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NHEJ1Q9H9Q4 299 aaPredicted RBP17.57■□□□□ 0.4
SCAF11-206ENST00000474828 ANLNQ9NQW6 1124 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 XPO7Q9UIA9 1087 aaKnown RBP17.57■□□□□ 0.4
SCAF11-206ENST00000474828 PAXBP1Q9Y5B6 917 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 ZNF318Q5VUA4 2279 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 ZDBF2Q9HCK1 2354 aa17.57■□□□□ 0.4
SCAF11-206ENST00000474828 ANKRD62A6NC57 917 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 TMCO5BA8MYB1 307 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-206ENST00000474828 NCAM2O15394 837 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 GJB6O95452 261 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 GPD1P21695 349 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 HOXD9P28356 352 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-206ENST00000474828 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
SCAF11-206ENST00000474828 HDAC4P56524 1084 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 OGDHQ02218 1023 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 MESP2Q0VG99 397 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 PON2Q15165 354 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 FBXO43Q4G163 708 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 MS4A13Q5J8X5 152 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 KIAA0907Q7Z7F0 614 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-206ENST00000474828 DNAAF5Q86Y56 855 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 ZNF683Q8IZ20 524 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 FLCNQ8NFG4 579 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 PRICKLE1Q96MT3 831 aaPredicted RBP17.56■□□□□ 0.4
SCAF11-206ENST00000474828 HAPLN3Q96S86 360 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 PNKPQ96T60 521 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 CNPY3Q9BT09 278 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 BBS2Q9BXC9 721 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 CHRDQ9H2X0 955 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 CNOT8Q9UFF9 292 aaKnown RBP17.56■□□□□ 0.4
SCAF11-206ENST00000474828 SCINQ9Y6U3 715 aa17.56■□□□□ 0.4
SCAF11-206ENST00000474828 FAM170AA1A519 330 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 K7EQS6 105 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 SLC6A11P48066 632 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 NRG1Q02297 640 aaPredicted RBP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 DEUP1Q05D60 604 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 GFPT1Q06210 699 aaPredicted RBP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 ZNF252P-AS1Q0IIN9 211 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 SCAPQ12770 1279 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 GRSF1Q12849 480 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 LRRC32Q14392 662 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 TCEAL1Q15170 157 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 PREPLQ4J6C6 727 aaPredicted RBP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 CCDC122Q5T0U0 273 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 SH3PXD2AQ5TCZ1 1133 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 KCNV2Q8TDN2 545 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 NTAN1Q96AB6 310 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 MYEOVQ96EZ4 313 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 LMLNQ96KR4 655 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 MCEEQ96PE7 176 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 XPO6Q96QU8 1125 aaKnown RBP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 WDCPQ9H6R7 721 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 MRPL47Q9HD33 250 aaKnown RBP17.55■□□□□ 0.4
SCAF11-206ENST00000474828 SLC12A6Q9UHW9 1150 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
SCAF11-206ENST00000474828 IGLV3-10A0A075B6K4 115 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 GOLGA6L7A0A1B0GV03 622 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 CHURC1-FNTBB4DL54 471 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 PAGE1O75459 146 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 CYBBP04839 570 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 ABCB4P21439 1286 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 GRIA2P42262 883 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 TNFRSF4P43489 277 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 ATXN1P54253 815 aaKnown RBP17.54■□□□□ 0.4
SCAF11-206ENST00000474828 GALCP54803 685 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 NME3Q13232 169 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 UBXN2BQ14CS0 331 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 C15orf59Q2T9L4 293 aaPredicted RBP17.54■□□□□ 0.4
SCAF11-206ENST00000474828 ANO4Q32M45 955 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 RAB6CQ53S08 254 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 TPGS1Q6ZTW0 290 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 SND1Q7KZF4 910 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCAF11-206ENST00000474828 CCDC170Q8IYT3 715 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 ZNF653Q96CK0 615 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 TMA16Q96EY4 203 aaKnown RBP17.54■□□□□ 0.4
SCAF11-206ENST00000474828 CCDC42Q96M95 316 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 TKTL2Q9H0I9 626 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 RAB6CQ9H0N0 254 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 THAP2Q9H0W7 228 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 LMAN1LQ9HAT1 526 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 DEC1Q9P2X7 70 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 HS3ST4Q9Y661 456 aa17.54■□□□□ 0.4
SCAF11-206ENST00000474828 DRGXA6NNA5 263 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 NEDD8-MDP1E9PL57 170 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 CCP110O43303 1012 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 KAT7O95251 611 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 PAPSS2O95340 614 aaPredicted RBP17.53■□□□□ 0.4
SCAF11-206ENST00000474828 EGFP01133 1207 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 TACR2P21452 398 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 ADRA1BP35368 520 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 SGSHP51688 502 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 AIF1P55008 147 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 GAS6Q14393 721 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 ACAP1Q15027 740 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 C10orf76Q5T2E6 689 aa17.53■□□□□ 0.4
SCAF11-206ENST00000474828 TTC39BQ5VTQ0 682 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms