RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PPM1JQ5JR12 505 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TEDDM1Q5T9Z0 273 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 CES3Q6UWW8 571 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 ARMCX2Q7L311 632 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 TMPRSS6Q8IU80 811 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 MFN1Q8IWA4 741 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 ULK2Q8IYT8 1036 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 THTPAQ9BU02 230 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 APOL6Q9BWW8 343 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
C9orf3-214ENST00000473778 ZNF358Q9NW07 568 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 GTF2IRD1Q9UHL9 959 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 KIAA1257Q9ULG3 409 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 CSADQ9Y600 493 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 SBF1O95248 1867 aa11.28□□□□□ -0.6
C9orf3-214ENST00000473778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 DGKIO75912 1065 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 USP1O94782 785 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 ALDH1A2O94788 518 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 PDGFRBP09619 1106 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 TTLL4Q14679 1199 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 PCLAFQ15004 111 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 STILQ15468 1287 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 RABGAP1LQ5R372 815 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 N4BP2L1Q5TBK1 243 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 OTUD1Q5VV17 481 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 ATG16L1Q676U5 607 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 MTHFD1LQ6UB35 978 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 CDKL3Q8IVW4 592 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 SMC1BQ8NDV3 1235 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 KBTBD7Q8WVZ9 684 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 MTBPQ96DY7 904 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 SORT1Q99523 831 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 WWP1Q9H0M0 922 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 CDHR5Q9HBB8 845 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 XAB2Q9HCS7 855 aaKnown RBP11.27□□□□□ -0.6
C9orf3-214ENST00000473778 TAGLN3Q9UI15 199 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 GINS2Q9Y248 185 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 RALGAPA2Q2PPJ7 1873 aa11.27□□□□□ -0.6
C9orf3-214ENST00000473778 SPTLC1O15269 473 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 MAGEC1O60732 1142 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 TM7SF2O76062 418 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 NPTXRO95502 500 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 SLC25A27O95847 323 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 AMHP03971 560 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 CD1EP15812 388 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 MGAT1P26572 445 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 PTPN9P43378 593 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 SESN2P58004 480 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-214ENST00000473778 KLC1Q07866 573 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 STX3Q13277 289 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 ZBTB6Q15916 424 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 KIZQ2M2Z5 673 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 TSNAXIP1Q2TAA8 658 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 LGSNQ5TDP6 509 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 VWA5B1Q5TIE3 1220 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 ARMC3Q5W041 872 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 STEAP4Q687X5 459 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 HEATR6Q6AI08 1181 aaKnown RBP11.27□□□□□ -0.61
C9orf3-214ENST00000473778 OR52E8Q6IFG1 317 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 TMEM154Q6P9G4 183 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 RNF111Q6ZNA4 994 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 TIFABQ6ZNK6 161 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 SLC26A9Q7LBE3 791 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 CRLF3Q8IUI8 442 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 POU5F2Q8N7G0 328 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 OR6B3Q8NGW1 331 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 HTR3CQ8WXA8 447 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 OXCT2Q9BYC2 517 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-214ENST00000473778 PIDD1Q9HB75 910 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 PPM1HQ9ULR3 514 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 DNAJC16Q9Y2G8 782 aa11.27□□□□□ -0.61
C9orf3-214ENST00000473778 A0A088AWK7 358 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 A6NJR5 290 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 BIRC5O15392 142 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 SERPINA6P08185 405 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 TKTP29401 623 aaKnown RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 ADCYAP1R1P41586 468 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PAPOLAP51003 745 aaKnown RBP11.26□□□□□ -0.61
C9orf3-214ENST00000473778 SLC25A3Q00325 362 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 AP1B1Q10567 949 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PEX6Q13608 980 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 RALGPS1Q5JS13 557 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 RNF220Q5VTB9 566 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 FOXB2Q5VYV0 432 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 BSPRYQ5W0U4 402 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 CASC4Q6P4E1 433 aa11.26□□□□□ -0.61
C9orf3-214ENST00000473778 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms