RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 GNA15P30679 374 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 NUMBP49757 651 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 RPS24P62847 133 aaKnown RBP17.34■□□□□ 0.37
USP40-212ENST00000473191 DPCR1Q3MIW9 517 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 SPDYCQ5MJ68 293 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 SLC36A4Q6YBV0 504 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 MMS22LQ6ZRQ5 1243 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 KIAA0907Q7Z7F0 614 aaPredicted RBP17.34■□□□□ 0.37
USP40-212ENST00000473191 PASD1Q8IV76 773 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 CFAP52Q8N1V2 620 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 DDX1Q92499 740 aaKnown RBP17.34■□□□□ 0.37
USP40-212ENST00000473191 FAM149B1Q96BN6 582 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 TOE1Q96GM8 510 aaKnown RBP17.34■□□□□ 0.37
USP40-212ENST00000473191 SLC39A13Q96H72 371 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 LMLNQ96KR4 655 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 SLC2A11Q9BYW1 496 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 USP36Q9P275 1121 aaKnown RBP17.34■□□□□ 0.37
USP40-212ENST00000473191 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
USP40-212ENST00000473191 FBXO21O94952 628 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 LATS1O95835 1130 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 TOP3BO95985 862 aaKnown RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 PABPC1P11940 636 aaKnown RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 PMLP29590 882 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 USP8P40818 1118 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 NOVA1P51513 510 aaKnown RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 TPMTP51580 245 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 STARD3Q14849 445 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 FSCBQ5H9T9 825 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 SH3PXD2AQ5TCZ1 1133 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 DPY19L2P1Q6NXN4 242 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 SERPINA13PQ6UXR4 307 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 UCMAQ8WVF2 138 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 ZNF419Q96HQ0 510 aaPredicted RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 GPR174Q9BXC1 333 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 NUSAP1Q9BXS6 441 aaKnown RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 TMEM245Q9H330 911 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 CLSTN2Q9H4D0 955 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 CAPN10Q9HC96 672 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 ITM2CQ9NQX7 267 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 WSB2Q9NYS7 404 aaPredicted RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 APEX2Q9UBZ4 518 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 INTS6Q9UL03 887 aaKnown RBP17.33■□□□□ 0.36
USP40-212ENST00000473191 SLCO1B1Q9Y6L6 691 aa17.33■□□□□ 0.36
USP40-212ENST00000473191 ZBTB24O43167 697 aaPredicted RBP17.32■□□□□ 0.36
USP40-212ENST00000473191 SYNCRIPO60506 623 aaKnown RBP17.32■□□□□ 0.36
USP40-212ENST00000473191 FGFR1OPO95684 399 aaKnown RBP17.32■□□□□ 0.36
USP40-212ENST00000473191 MOCS2O96007 188 aaPredicted RBP17.32■□□□□ 0.36
USP40-212ENST00000473191 CD6P30203 668 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 RING1Q06587 406 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 LMAN2Q12907 356 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 PDCLQ13371 301 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 EIF4HQ15056 248 aaKnown RBP17.32■□□□□ 0.36
USP40-212ENST00000473191 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 MBLAC2Q68D91 279 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 GBP6Q6ZN66 633 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 TMEM110Q86TL2 294 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP40-212ENST00000473191 DEFB124Q8NES8 71 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 SIPA1Q96FS4 1042 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 MYO19Q96H55 970 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 CPXM1Q96SM3 734 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 GTPBP2Q9BX10 602 aaKnown RBP17.32■□□□□ 0.36
USP40-212ENST00000473191 PLCB1Q9NQ66 1216 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 GON4LQ3T8J9 2241 aa17.32■□□□□ 0.36
USP40-212ENST00000473191 NDUFS2O75306 463 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 IGLV3-25P01717 112 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 MTIF2P46199 727 aaKnown RBP17.31■□□□□ 0.36
USP40-212ENST00000473191 SLC11A2P49281 568 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 DUOXA1Q1HG43 343 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 FNDC3BQ53EP0 1204 aaKnown RBP17.31■□□□□ 0.36
USP40-212ENST00000473191 ZC3H12AQ5D1E8 599 aaKnown RBP17.31■□□□□ 0.36
USP40-212ENST00000473191 MIIPQ5JXC2 388 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 DAB2IPQ5VWQ8 1189 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 NUGGCQ68CJ6 796 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 FAM124AQ86V42 546 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 UNC45BQ8IWX7 931 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 RGL4Q8IZJ4 473 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 MLKLQ8NB16 471 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 SHC3Q92529 594 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 GOLGA1Q92805 767 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 SLC6A14Q9UN76 642 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 TLR6Q9Y2C9 796 aa17.31■□□□□ 0.36
USP40-212ENST00000473191 PI4KAP42356 2102 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 NPC1O15118 1278 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 IRAK2O43187 625 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 MED7O43513 233 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 GRAP2O75791 330 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 SERPINF2P08697 491 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 SPINK2P20155 84 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 CLCN1P35523 988 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 CTSOP43234 321 aaPredicted RBP17.3■□□□□ 0.36
USP40-212ENST00000473191 ACADSBP45954 432 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 ARID5AQ03989 594 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 KCNMA1Q12791 1236 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 EIF4EBP2Q13542 120 aaPredicted RBP17.3■□□□□ 0.36
USP40-212ENST00000473191 CAMK2GQ13555 558 aaPredicted RBP17.3■□□□□ 0.36
USP40-212ENST00000473191 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 MS4A13Q5J8X5 152 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 RAP1GAP2Q684P5 730 aa17.3■□□□□ 0.36
USP40-212ENST00000473191 METTL3Q86U44 580 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms