RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ARHGEF38Q9NXL2 777 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 CLIC5Q9NZA1 410 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 DTLQ9NZJ0 730 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 FNIP2Q9P278 1114 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 HSFX1Q9UBD0 423 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 MTRRQ9UBK8 725 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 XPO7Q9UIA9 1087 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 BACE2Q9Y5Z0 518 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 MYO18AQ92614 2054 aaKnown RBP9.65□□□□□ -0.87
SMC1A-205ENST00000469129 CLUHO75153 1309 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 A0A0A0MRY4 1105 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 A0A1W2PQH9 124 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 FAM92AA1XBS5 289 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 E7ESA3 106 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 TBC1D4O60343 1298 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 OPHN1O60890 802 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 TIMP1P01033 207 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 APOEP02649 317 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 HAPLN1P10915 354 aaPredicted RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 LMAN1P49257 510 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 PPP2R2AP63151 447 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 CDK16Q00536 496 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 NRG1Q02297 640 aaPredicted RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 CREMQ03060 361 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 ZNF33AQ06730 810 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 NR1H3Q13133 447 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 CBLBQ13191 982 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 KYNUQ16719 465 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 KCTD19Q17RG1 926 aaPredicted RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 MGAT5BQ3V5L5 792 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 CCDC38Q502W7 563 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 DNAJC21Q5F1R6 531 aaKnown RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 RTP2Q5QGT7 225 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 SPOUT1Q5T280 376 aaKnown RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 EMC10Q5UCC4 262 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 SLC8B1Q6J4K2 584 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 KIAA1841Q6NSI8 718 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 NECAB2Q7Z6G3 386 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 TADA2BQ86TJ2 420 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 PRUNE1Q86TP1 453 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 ZBED8Q8IZ13 594 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 LZTR1Q8N653 840 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 MCUQ8NE86 351 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 PDZD8Q8NEN9 1154 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 SCAMP5Q8TAC9 235 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 DIS3LQ8TF46 1054 aaKnown RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 OVCA2Q8WZ82 227 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 FBXO32Q969P5 355 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 TLCD1Q96CP7 247 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 LRRC39Q96DD0 335 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 TBC1D31Q96DN5 1066 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 IGSF21Q96ID5 467 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 SPATA13Q96N96 652 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 PGLYRP2Q96PD5 576 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 SEPT5Q99719 369 aaPredicted RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 CATSPERBQ9H7T0 1116 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 VPS37BQ9H9H4 285 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 XAB2Q9HCS7 855 aaKnown RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 EIF2B3Q9NR50 452 aaKnown RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 RAB6BQ9NRW1 208 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 DNAJC17Q9NVM6 304 aaKnown RBP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 DONSONQ9NYP3 566 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 IL37Q9NZH6 218 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMC1A-205ENST00000469129 OR12D3Q9UGF7 316 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 TLR6Q9Y2C9 796 aa9.64□□□□□ -0.87
SMC1A-205ENST00000469129 EXOC1LA0A1B0GW35 172 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SRRM3A6NNA2 597 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 E7EVH7 732 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 KIAA0355O15063 1070 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 ALOX15BO15296 676 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SHOX2O60902 331 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 CDH16O75309 829 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 TMEM63AO94886 807 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 UPP2O95045 317 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SOD2P04179 222 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SHBGP04278 402 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 GSTA2P09210 222 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 ERCC2P18074 760 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 HOXC13P31276 330 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 PPM1AP35813 382 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 TUFMP49411 452 aaKnown RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 KPNA1P52294 538 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 GYS2P54840 703 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 ARPP19P56211 112 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 AP1B1Q10567 949 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SEMA5AQ13591 1074 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 DDR2Q16832 855 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 KLHL38Q2WGJ6 581 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 ITPRIPL1Q6GPH6 555 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 LEKR1Q6ZMV7 388 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 RNF168Q8IYW5 571 aaPredicted RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 CNPY4Q8N129 248 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 ATP6V0D2Q8N8Y2 350 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 FBXO22Q8NEZ5 403 aa9.63□□□□□ -0.87
SMC1A-205ENST00000469129 EPS8L3Q8TE67 593 aaKnown RBP9.63□□□□□ -0.87
SMC1A-205ENST00000469129 PYROXD1Q8WU10 500 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms