RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ELF2Q15723 593 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 NAA35Q5VZE5 725 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 CHST9Q7L1S5 443 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 APTXQ7Z2E3 356 aaKnown RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 PHLDB2Q86SQ0 1253 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 ERICH1Q86X53 443 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 DHX40Q8IX18 779 aaKnown RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 LGI2Q8N0V4 545 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 CARNMT1Q8N4J0 409 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 DEFB119Q8N690 84 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 GPR161Q8N6U8 529 aaKnown RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 NEK11Q8NG66 645 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 OLIG1Q8TAK6 271 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 CYB5D2Q8WUJ1 264 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 UCMAQ8WVF2 138 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 AZIN2Q96A70 460 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 RMDN1Q96DB5 314 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 ZC3H10Q96K80 434 aaKnown RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 PRICKLE1Q96MT3 831 aaPredicted RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 SPAG5Q96R06 1193 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 GABRG3Q99928 467 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 NAT10Q9H0A0 1025 aaKnown RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 ASNSD1Q9NWL6 643 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 DDIT4Q9NX09 232 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 THAP10Q9P2Z0 257 aaPredicted RBP11.98□□□□□ -0.49
CDHR3-205ENST00000468143 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
CDHR3-205ENST00000468143 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 LRRC10BA6NIK2 292 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 GOLGA8SH3BPF8 625 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 ZBTB24O43167 697 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 HSF2BPO75031 334 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 EPN2O95208 641 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 GLI1P08151 1106 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 PABPC1P11940 636 aaKnown RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CHRNB2P17787 502 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 NDUFV2P19404 249 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 TFE3P19532 575 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 TACR2P21452 398 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 P2RY2P41231 377 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 STAT1P42224 750 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 NUMBP49757 651 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 JAM2P57087 298 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 ZNF445P59923 1031 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CREB5Q02930 508 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 NNTQ13423 1086 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 EIF4EBP2Q13542 120 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 SF3A2Q15428 464 aaKnown RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CSRP2Q16527 193 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 RSPO4Q2I0M5 234 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 MAP7D1Q3KQU3 841 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 MS4A13Q5J8X5 152 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 MMS22LQ6ZRQ5 1243 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 ARMCX6Q7L4S7 300 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 ADIPOR2Q86V24 386 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CHSY1Q86X52 802 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 TMEFF1Q8IYR6 380 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 ATP6V0D2Q8N8Y2 350 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 EPS8L1Q8TE68 723 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 C18orf8Q96DM3 657 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 LOXL4Q96JB6 756 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 DDX50Q9BQ39 737 aaKnown RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CD248Q9HCU0 757 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CD93Q9NPY3 652 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 CALCOCO1Q9P1Z2 691 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 MBD1Q9UIS9 605 aaPredicted RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 GGA2Q9UJY4 613 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 NOCTQ9UK39 431 aaKnown RBP11.97□□□□□ -0.49
CDHR3-205ENST00000468143 KIAA1549LQ6ZVL6 1849 aa11.97□□□□□ -0.49
CDHR3-205ENST00000468143 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.96□□□□□ -0.49
CDHR3-205ENST00000468143 SYCE3A1L190 88 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 SMTNL1A8MU46 457 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 KCNU1A8MYU2 1149 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 M0QYT0 321 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 TEX33O43247 280 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 TIMM44O43615 452 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 GDF9O60383 454 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 DAB1O75553 588 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 EPHX1P07099 455 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 HLA-EP13747 358 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 ABCB4P21439 1286 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 PRKCHP24723 683 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 NOS2P35228 1153 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 GGCXP38435 758 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 GABRB2P47870 512 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 DHPSP49366 369 aaPredicted RBP11.96□□□□□ -0.49
CDHR3-205ENST00000468143 ZNF165P49910 485 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 NOMO3P69849 1222 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 CDR2Q01850 454 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 FUT11Q495W5 492 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 FSCBQ5H9T9 825 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 MPP7Q5T2T1 576 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 FAM102AQ5T9C2 384 aaPredicted RBP11.96□□□□□ -0.49
CDHR3-205ENST00000468143 PMS2CLQ68D20 193 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 MBLAC2Q68D91 279 aa11.96□□□□□ -0.49
CDHR3-205ENST00000468143 KIAA1324Q6UXG2 1013 aaKnown RBP11.96□□□□□ -0.49
CDHR3-205ENST00000468143 PRR23CQ6ZRP0 262 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms