RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 SGSHP51688 502 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 CDK17Q00537 523 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 SLC6A3Q01959 620 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 ZC3H12AQ5D1E8 599 aaKnown RBP18.84■□□□□ 0.61
CGREF1-208ENST00000467539 FKBP15Q5T1M5 1219 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 OR6B2Q6IFH4 312 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 ERMP1Q7Z2K6 904 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 ZDHHC17Q8IUH5 632 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 DEFB106AQ8N104 65 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 FRMD1Q8N878 549 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 ZNF557Q8N988 423 aaPredicted RBP18.84■□□□□ 0.61
CGREF1-208ENST00000467539 FIBINQ8TAL6 211 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 WFIKKN2Q8TEU8 576 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 DDX1Q92499 740 aaKnown RBP18.84■□□□□ 0.61
CGREF1-208ENST00000467539 SPACA7Q96KW9 195 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 GANQ9H2C0 597 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 PDCL3Q9H2J4 239 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 VPS45Q9NRW7 570 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 SLC12A6Q9UHW9 1150 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 MBD1Q9UIS9 605 aaPredicted RBP18.84■□□□□ 0.61
CGREF1-208ENST00000467539 DAAM1Q9Y4D1 1078 aa18.84■□□□□ 0.61
CGREF1-208ENST00000467539 HSF2BPO75031 334 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ZNF217O75362 1048 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ERBB2P04626 1255 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 SLC2A3P11169 496 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 IL12RB1P42701 662 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 GABRB2P47870 512 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 COPB1P53618 953 aaKnown RBP18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ZNF234Q14588 700 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 NCAPHQ15003 741 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 PTPN20Q4JDL3 420 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 MS4A13Q5J8X5 152 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 OLFML1Q6UWY5 402 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 FAM183BPQ6ZVS7 135 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 SLC26A9Q7LBE3 791 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 METTL3Q86U44 580 aaKnown RBP18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ADIPOR2Q86V24 386 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ANKRD20A12PQ8NF67 263 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ZNF397Q8NF99 534 aaPredicted RBP18.83■□□□□ 0.6
CGREF1-208ENST00000467539 BTN2A3PQ96KV6 586 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 CIPCQ9C0C6 399 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 ABCB8Q9NUT2 735 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 TMEM63CQ9P1W3 806 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 PLA2G4CQ9UP65 541 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 RAD54BQ9Y620 910 aa18.83■□□□□ 0.6
CGREF1-208ENST00000467539 DCHS1Q96JQ0 3298 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 KCNU1A8MYU2 1149 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 F8VZ95 297 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 CAVIN2O95810 425 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 APOEP02649 317 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 ZNF18P17022 549 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 NDUFV2P19404 249 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 CDK11BP21127 795 aaKnown RBP18.82■□□□□ 0.6
CGREF1-208ENST00000467539 NOS2P35228 1153 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 MPLP40238 635 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 ATXN1P54253 815 aaKnown RBP18.82■□□□□ 0.6
CGREF1-208ENST00000467539 PITX1P78337 314 aaPredicted RBP18.82■□□□□ 0.6
CGREF1-208ENST00000467539 FOXK2Q01167 660 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 CREB5Q02930 508 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 ARID5AQ03989 594 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 STARD3Q14849 445 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 SF3A2Q15428 464 aaKnown RBP18.82■□□□□ 0.6
CGREF1-208ENST00000467539 CCDC6Q16204 474 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 SLC36A4Q6YBV0 504 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 CHST9Q7L1S5 443 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 LPCAT2Q7L5N7 544 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 ZNF677Q86XU0 584 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 ATP6V0D2Q8N8Y2 350 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 HJURPQ8NCD3 748 aaPredicted RBP18.82■□□□□ 0.6
CGREF1-208ENST00000467539 NETO1Q8TDF5 533 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 C18orf8Q96DM3 657 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 LMLNQ96KR4 655 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 MRGPRX1Q96LB2 322 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 SYNCQ9H7C4 482 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 CALCOCO1Q9P1Z2 691 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 STIM2Q9P246 746 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 GGA2Q9UJY4 613 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 SIK3Q9Y2K2 1263 aa18.82■□□□□ 0.6
CGREF1-208ENST00000467539 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 SYNCRIPO60506 623 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 GRAP2O75791 330 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 ATP5BP06576 529 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 PABPC1P11940 636 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 KLK7P49862 253 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 POLR2FP61218 127 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 RPS24P62847 133 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 TYRO3Q06418 890 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 FUT11Q495W5 492 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 NOP9Q86U38 636 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 ERICH1Q86X53 443 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 AHI1Q8N157 1196 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 C12orf50Q8NA57 414 aaPredicted RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 SORCS1Q8WY21 1168 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 MYEOVQ96EZ4 313 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 RTKNQ9BST9 563 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 NUCKS1Q9H1E3 243 aaKnown RBP18.81■□□□□ 0.6
CGREF1-208ENST00000467539 HSD3B7Q9H2F3 369 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 RRN3Q9NYV6 651 aa18.81■□□□□ 0.6
CGREF1-208ENST00000467539 XPO7Q9UIA9 1087 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms