RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 MRGPRX1Q96LB2 322 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 CIPCQ9C0C6 399 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 NUCKS1Q9H1E3 243 aaKnown RBP22.63■■□□□ 1.21
LIME1-203ENST00000465591 POPDC2Q9HBU9 364 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 VPS45Q9NRW7 570 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 ABCB8Q9NUT2 735 aa22.63■■□□□ 1.21
LIME1-203ENST00000465591 LAMA1P25391 3075 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 DCDC2BA2VCK2 349 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 CAPN9O14815 690 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 IRAK2O43187 625 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 TBL1XO60907 577 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 CAVIN2O95810 425 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 TRUB2O95900 331 aaKnown RBP22.62■■□□□ 1.21
LIME1-203ENST00000465591 PRKCHP24723 683 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 PTGER3P43115 390 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 DHPSP49366 369 aaPredicted RBP22.62■■□□□ 1.21
LIME1-203ENST00000465591 EIF4EBP2Q13542 120 aaPredicted RBP22.62■■□□□ 1.21
LIME1-203ENST00000465591 KRT31Q15323 416 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 FUT11Q495W5 492 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 ZC3H12AQ5D1E8 599 aaKnown RBP22.62■■□□□ 1.21
LIME1-203ENST00000465591 SMYD5Q6GMV2 418 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 FAM183BPQ6ZVS7 135 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 ARMCX6Q7L4S7 300 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 KIAA0907Q7Z7F0 614 aaPredicted RBP22.62■■□□□ 1.21
LIME1-203ENST00000465591 ADIPOR2Q86V24 386 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.62■■□□□ 1.21
LIME1-203ENST00000465591 SPACA7Q96KW9 195 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 VPS16Q9H269 839 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 FANCLQ9NW38 375 aa22.62■■□□□ 1.21
LIME1-203ENST00000465591 IGHV1OR15-9A0A0B4J2B8 117 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 MED19A0JLT2 244 aaPredicted RBP22.61■■□□□ 1.21
LIME1-203ENST00000465591 FAM170AA1A519 330 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 SLC30A4O14863 429 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 GRAP2O75791 330 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 MOCS2O96007 188 aaPredicted RBP22.61■■□□□ 1.21
LIME1-203ENST00000465591 UCHL3P15374 230 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 CD70P32970 193 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 KRT9P35527 623 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 RPS24P62847 133 aaKnown RBP22.61■■□□□ 1.21
LIME1-203ENST00000465591 EIF4HQ15056 248 aaKnown RBP22.61■■□□□ 1.21
LIME1-203ENST00000465591 AASDHQ4L235 1098 aaPredicted RBP22.61■■□□□ 1.21
LIME1-203ENST00000465591 OLFML1Q6UWY5 402 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 CHST9Q7L1S5 443 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 DEFB106AQ8N104 65 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 C12orf50Q8NA57 414 aaPredicted RBP22.61■■□□□ 1.21
LIME1-203ENST00000465591 CYB5D2Q8WUJ1 264 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 UCMAQ8WVF2 138 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 LMLNQ96KR4 655 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 SLC2A13Q96QE2 648 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 GANQ9H2C0 597 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 STIM2Q9P246 746 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 GGA2Q9UJY4 613 aa22.61■■□□□ 1.21
LIME1-203ENST00000465591 PATE3B3GLJ2 98 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 MAP3K13O43283 966 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 PABPC1P11940 636 aaKnown RBP22.6■■□□□ 1.21
LIME1-203ENST00000465591 CYP11B1P15538 503 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 SDHBP21912 280 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 DCAF6Q58WW2 860 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 MPP7Q5T2T1 576 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 LPCAT2Q7L5N7 544 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 CYP2U1Q7Z449 544 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 DEFB119Q8N690 84 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 DDX1Q92499 740 aaKnown RBP22.6■■□□□ 1.21
LIME1-203ENST00000465591 RTKNQ9BST9 563 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 TRIM62Q9BVG3 475 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 MKRN2Q9H000 416 aaKnown RBP22.6■■□□□ 1.21
LIME1-203ENST00000465591 CYP8B1Q9UNU6 501 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 NUMA1Q14980 2115 aa22.6■■□□□ 1.21
LIME1-203ENST00000465591 GOLGA6L22H0YM25 854 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 NPC1O15118 1278 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 FOXD2O60548 495 aaPredicted RBP22.59■■□□□ 1.21
LIME1-203ENST00000465591 HLA-EP13747 358 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 MS4A13Q5J8X5 152 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 OR6B2Q6IFH4 312 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 CFAP52Q8N1V2 620 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 WFIKKN2Q8TEU8 576 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 PIGKQ92643 395 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 TMEM74BQ9NUR3 256 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 ASNSD1Q9NWL6 643 aa22.59■■□□□ 1.21
LIME1-203ENST00000465591 F8VZ95 297 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 EPHB6O15197 1021 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 GLI1P08151 1106 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 BYSLQ13895 437 aaKnown RBP22.58■■□□□ 1.21
LIME1-203ENST00000465591 PTPRNQ16849 979 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 TAF3Q5VWG9 929 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 RAP1GAP2Q684P5 730 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 MBLAC2Q68D91 279 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 SASS6Q6UVJ0 657 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 KIAA1324Q6UXG2 1013 aaKnown RBP22.58■■□□□ 1.21
LIME1-203ENST00000465591 NOP9Q86U38 636 aaKnown RBP22.58■■□□□ 1.21
LIME1-203ENST00000465591 ZNF366Q8N895 744 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 HJURPQ8NCD3 748 aaPredicted RBP22.58■■□□□ 1.21
LIME1-203ENST00000465591 STK33Q9BYT3 514 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 ADAM33Q9BZ11 813 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 IRX2Q9BZI1 471 aaPredicted RBP22.58■■□□□ 1.21
LIME1-203ENST00000465591 ANO10Q9NW15 660 aa22.58■■□□□ 1.21
LIME1-203ENST00000465591 ATXN2Q99700 1313 aaKnown RBP22.57■■□□□ 1.2
LIME1-203ENST00000465591 ADAMTS9Q9P2N4 1935 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 SYNJ2BP-COX16A0A087WUM0 186 aa22.57■■□□□ 1.2
LIME1-203ENST00000465591 TIMM44O43615 452 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms