RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 MYO1AQ9UBC5 1043 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 STAP1Q9ULZ2 295 aa12.1□□□□□ -0.47
CUX1-207ENST00000465461 TBC1D3BA6NDS4 549 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 SIGLEC16A6NMB1 481 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 PRRT4C9JH25 899 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 GFRA2O00451 464 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 CACNG3O60359 315 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 MFAP3LO75121 409 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 RTN2O75298 545 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 LATS1O95835 1130 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 APODP05090 189 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 ABCB4P21439 1286 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 TACR2P21452 398 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 GPD1P21695 349 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 CCR1P32246 355 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 TIE1P35590 1138 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 RPS9P46781 194 aaKnown RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 DGKGP49619 791 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 NUMBP49757 651 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 IRAK1P51617 712 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 GSCP56915 257 aaPredicted RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 RPS24P62847 133 aaKnown RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 SATB1Q01826 763 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 OGDHQ02218 1023 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 NNTQ13423 1086 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 TRIM14Q14142 442 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 ANGPT1Q15389 498 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 MPPE1Q53F39 396 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 GRAMD4Q6IC98 578 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 C14orf80Q86SX3 495 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 CHSY1Q86X52 802 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 FAM131BQ86XD5 332 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 C1orf210Q8IVY1 113 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 CCDC33Q8N5R6 958 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 ATP6V0D2Q8N8Y2 350 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 C3orf20Q8ND61 904 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 RPLP0P6Q8NHW5 317 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 WFDC5Q8TCV5 224 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 BTN2A3PQ96KV6 586 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 DNAJC7Q99615 494 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 TRIM7Q9C029 511 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 TKTL2Q9H0I9 626 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 SIK2Q9H0K1 926 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 WDCPQ9H6R7 721 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 HCN2Q9UL51 889 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 HS3ST4Q9Y661 456 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 BZW2Q9Y6E2 419 aaKnown RBP12.09□□□□□ -0.47
CUX1-207ENST00000465461 ZNF318Q5VUA4 2279 aa12.09□□□□□ -0.47
CUX1-207ENST00000465461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 AKR1B15C9JRZ8 316 aaPredicted RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 CCP110O43303 1012 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 PAGE1O75459 146 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 TPM1P09493 284 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 GZMAP12544 262 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 SDC4P31431 198 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 HNRNPH3P31942 346 aaKnown RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 RDXP35241 583 aaKnown RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 EIF2DP41214 584 aaKnown RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 GRIA2P42262 883 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 WASP42768 502 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 CXCR3P49682 368 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 CSTF1Q05048 431 aaKnown RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 MAMLD1Q13495 774 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 PPP2R5DQ14738 602 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 GEN1Q17RS7 908 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 PPP1R15BQ5SWA1 713 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 CCDC122Q5T0U0 273 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 C10orf76Q5T2E6 689 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 ARCQ7LC44 396 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 BNIPLQ7Z465 357 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 IGSF8Q969P0 613 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 ZNF653Q96CK0 615 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 PGAP3Q96FM1 320 aaPredicted RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 PRMT1Q99873 361 aaKnown RBP12.08□□□□□ -0.48
CUX1-207ENST00000465461 THAP2Q9H0W7 228 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 ISCUQ9H1K1 167 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 FAM86C1Q9NVL1 165 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 ARHGEF38Q9NXL2 777 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 SLC12A6Q9UHW9 1150 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 FBXO10Q9UK96 956 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 HCN4Q9Y3Q4 1203 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
CUX1-207ENST00000465461 A0A0A0MRY4 1105 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 LAMTOR5O43504 91 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 F9P00740 461 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
CUX1-207ENST00000465461 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
CUX1-207ENST00000465461 HDAC4P56524 1084 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 DMWDQ09019 674 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 AUHQ13825 339 aaKnown RBP12.07□□□□□ -0.48
CUX1-207ENST00000465461 ARID5BQ14865 1188 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 FSCBQ5H9T9 825 aa12.07□□□□□ -0.48
CUX1-207ENST00000465461 PLEKHA7Q6IQ23 1121 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms