RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ACBD6Q9BR61 282 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 ABI2Q9NYB9 513 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 IL1RAPL1Q9NZN1 696 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SENP1Q9P0U3 644 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 OR12D3Q9UGF7 316 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SMG5Q9UPR3 1016 aaKnown RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 WDR27A2RRH5 827 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 CCT8L1PA6NM43 557 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 DDHD2O94830 711 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 PYGBP11216 843 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 NOGQ13253 232 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 ARL13BQ3SXY8 428 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 GLB1LQ6UWU2 654 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 CD300LGQ6UXG3 332 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 UNC5AQ6ZN44 842 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 ZNF534Q76KX8 674 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 BZW1Q7L1Q6 419 aaKnown RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 RPAINQ86UA6 219 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SPATA2LQ8IUW3 424 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 CCDC63Q8NA47 563 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SERAC1Q96JX3 654 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 OLFM3Q96PB7 478 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 DMAP1Q9NPF5 467 aaPredicted RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 SFMBT1Q9UHJ3 866 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 FBXW11Q9UKB1 542 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 TTLL3Q9Y4R7 772 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 IQANK1A0A1B0GTG1 560 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 ZNF487B1APH4 448 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 TYROBPO43914 113 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 TSPY1Q01534 308 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 PDK1Q15118 436 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SLC39A12Q504Y0 691 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 RAB41Q5JT25 222 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 CES3Q6UWW8 571 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 YTHDF3Q7Z739 585 aaKnown RBP12.14□□□□□ -0.47
VTA1-203ENST00000452973 LRRC6Q86X45 466 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 LRRC8CQ8TDW0 803 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 DENND1AQ8TEH3 1009 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SLC17A6Q9P2U8 582 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 SRRDQ9UH36 339 aa12.14□□□□□ -0.47
VTA1-203ENST00000452973 TRIM49D1C9J1S8 452 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 PRPF4O43172 522 aaKnown RBP eCLIP12.13□□□□□ -0.47
VTA1-203ENST00000452973 MSI1O43347 362 aaKnown RBP12.13□□□□□ -0.47
VTA1-203ENST00000452973 SUN1O94901 812 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 PGFP49763 221 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 ARPP19P56211 112 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 MBTPS1Q14703 1052 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 TAC4Q86UU9 113 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 ZNF567Q8N184 647 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 NPWQ8N729 165 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 SLC44A1Q8WWI5 657 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 CCT6BQ92526 530 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 B3GALT6Q96L58 329 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 SIGLEC10Q96LC7 697 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 FERMT1Q9BQL6 677 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 SLC13A1Q9BZW2 595 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 SMYD2Q9NRG4 433 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 GGA2Q9UJY4 613 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 MKI67P46013 3256 aaKnown RBP12.13□□□□□ -0.47
VTA1-203ENST00000452973 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
VTA1-203ENST00000452973 LPXNO60711 386 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 MOCS2O96007 188 aaPredicted RBP12.13□□□□□ -0.47
VTA1-203ENST00000452973 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 DPYSQ14117 519 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 GPR152Q8TDT2 470 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 PLAC1Q9HBJ0 212 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 UBP1Q9NZI7 540 aa12.13□□□□□ -0.47
VTA1-203ENST00000452973 APOEP02649 317 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 MGAT1P26572 445 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 TRIM71Q2Q1W2 868 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 MROH9Q5TGP6 573 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 CGB2Q6NT52 195 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 FAM171BQ6P995 826 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 BHLHA9Q7RTU4 235 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 TTC17Q96AE7 1141 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 FAM111AQ96PZ2 611 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 EBNA1BP2Q99848 306 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 APOL2Q9BQE5 337 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 DHRS4Q9BTZ2 278 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 RCOR3Q9P2K3 495 aaPredicted RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 PHTF1Q9UMS5 762 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 DCLK1O15075 740 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 LRIG2O94898 1065 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 SLC5A3P53794 718 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 SARNPP82979 210 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 WASHC5Q12768 1159 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 DDR2Q16832 855 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 CLLU1OSQ5K130 101 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms