RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ABCB8Q9NUT2 735 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 PILRBQ9UKJ0 227 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 NAALADL1Q9UQQ1 740 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 NUMA1Q14980 2115 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 TBL1XO60907 577 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 ACADMP11310 421 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 CD6P30203 668 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 NNTQ13423 1086 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 DUOXA1Q1HG43 343 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 UAP1L1Q3KQV9 507 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 PIK3R6Q5UE93 754 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 TMEM215Q68D42 235 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 RFWD3Q6PCD5 774 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 CHST9Q7L1S5 443 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 RABEPKQ7Z6M1 372 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 METTL3Q86U44 580 aaKnown RBP13.4□□□□□ -0.26
CHD3-206ENST00000452447 TMPRSS6Q8IU80 811 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 AHI1Q8N157 1196 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 DQX1Q8TE96 717 aaKnown RBP13.4□□□□□ -0.26
CHD3-206ENST00000452447 PRCCQ92733 491 aaPredicted RBP13.4□□□□□ -0.26
CHD3-206ENST00000452447 AZIN2Q96A70 460 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 SIPA1Q96FS4 1042 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 HSPA12BQ96MM6 686 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 ACP6Q9NPH0 428 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 CD93Q9NPY3 652 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 DACH1Q9UI36 760 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 GGA2Q9UJY4 613 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 TLR6Q9Y2C9 796 aa13.4□□□□□ -0.26
CHD3-206ENST00000452447 GOLGA6L7A0A1B0GV03 622 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 E5RJQ4 531 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 CDX4O14627 284 aaPredicted RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 KCNK5O95279 499 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 FYNP06241 537 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 PABPC1P11940 636 aaKnown RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 PON1P27169 355 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 MAPK8P45983 427 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 ATXN3P54252 364 aaPredicted RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 PTK2Q05397 1052 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 MAN2A1Q16706 1144 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 FNDC3BQ53EP0 1204 aaKnown RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 FAM133BQ5BKY9 247 aaKnown RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 SYCP2LQ5T4T6 812 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 PEAR1Q5VY43 1037 aaPredicted RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 BEND5Q7L4P6 421 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 TMEM110Q86TL2 294 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 IRF2BP1Q8IU81 584 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 CCDC117Q8IWD4 279 aaPredicted RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 RGL4Q8IZJ4 473 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 ADAM32Q8TC27 787 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 FOXJ1Q92949 421 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 THAP9Q9H5L6 903 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 STIM2Q9P246 746 aa13.39□□□□□ -0.27
CHD3-206ENST00000452447 MAP1BP46821 2468 aaKnown RBP13.39□□□□□ -0.27
CHD3-206ENST00000452447 BECN2A8MW95 431 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 PAPSS1O43252 624 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 APOEP02649 317 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 PRKCSHP14314 528 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 ENGP17813 658 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 POLR2EP19388 210 aaKnown RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 PRKCHP24723 683 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 SLC6A4P31645 630 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 SGSHP51688 502 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 APBA1Q02410 837 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 GFPT1Q06210 699 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 PDCLQ13371 301 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 WDR45BQ5MNZ6 344 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 N4BP2L1Q5TBK1 243 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 SYPL2Q5VXT5 272 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 ADIPOR2Q86V24 386 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 MFN1Q8IWA4 741 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 HJURPQ8NCD3 748 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 CYB5D2Q8WUJ1 264 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 SHC3Q92529 594 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 TOE1Q96GM8 510 aaKnown RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 ZNF419Q96HQ0 510 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
CHD3-206ENST00000452447 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 SLC6A14Q9UN76 642 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 CEP295Q9C0D2 2601 aa13.38□□□□□ -0.27
CHD3-206ENST00000452447 CABIN1Q9Y6J0 2220 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 PES1O00541 588 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 MOCS2O96007 188 aaPredicted RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 SERPINF2P08697 491 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 DLDP09622 509 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 HLA-EP13747 358 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 ERCC5P28715 1186 aaPredicted RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 OXTRP30559 389 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 NOVA1P51513 510 aaKnown RBP13.37□□□□□ -0.27
CHD3-206ENST00000452447 DPCR1Q3MIW9 517 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 NADSYN1Q6IA69 706 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 TAC4Q86UU9 113 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 CACUL1Q86Y37 369 aa13.37□□□□□ -0.27
CHD3-206ENST00000452447 SLC41A1Q8IVJ1 513 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms