RNA–Protein interactions for RNA: ENST00000451998.1

TTC38-205, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 2

Gene TTC38, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-205ENST00000451998 VWA3BQ502W6 1294 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 FAM133BQ5BKY9 247 aaKnown RBP16.38■□□□□ 0.21
TTC38-205ENST00000451998 SYPL2Q5VXT5 272 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 TMEM215Q68D42 235 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 NADSYN1Q6IA69 706 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 FAM124AQ86V42 546 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 CHSY1Q86X52 802 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 MFN1Q8IWA4 741 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 CARNMT1Q8N4J0 409 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 HJURPQ8NCD3 748 aaPredicted RBP16.38■□□□□ 0.21
TTC38-205ENST00000451998 SHC3Q92529 594 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 HSPA12BQ96MM6 686 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 PRICKLE1Q96MT3 831 aaPredicted RBP16.38■□□□□ 0.21
TTC38-205ENST00000451998 TUBGCP2Q9BSJ2 902 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
TTC38-205ENST00000451998 SLC4A5Q9BY07 1137 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 SLC2A11Q9BYW1 496 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 NUCKS1Q9H1E3 243 aaKnown RBP16.38■□□□□ 0.21
TTC38-205ENST00000451998 PDCL3Q9H2J4 239 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 NDST4Q9H3R1 872 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 PRDM16Q9HAZ2 1276 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 TMEM74BQ9NUR3 256 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 TAB2Q9NYJ8 693 aa16.38■□□□□ 0.21
TTC38-205ENST00000451998 XPO7Q9UIA9 1087 aaKnown RBP16.38■□□□□ 0.21
TTC38-205ENST00000451998 GTPBP10A4D1E9 387 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 IGLV3-27P01718 113 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 ACADMP11310 421 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 KRT9P35527 623 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 LIMK1P53667 647 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 RPS24P62847 133 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 PITX1P78337 314 aaPredicted RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 PTK2Q05397 1052 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 CDH18Q13634 790 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 DCAF6Q58WW2 860 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 ZC3H12AQ5D1E8 599 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 PIK3R6Q5UE93 754 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 RAP1GAP2Q684P5 730 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 MBLAC2Q68D91 279 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 OR6B2Q6IFH4 312 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 SLC47A2Q86VL8 602 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 SYT12Q8IV01 421 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 CCDC117Q8IWD4 279 aaPredicted RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 RGL4Q8IZJ4 473 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 LGI2Q8N0V4 545 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 CFAP52Q8N1V2 620 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 WFIKKN2Q8TEU8 576 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 PRCCQ92733 491 aaPredicted RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 RNF34Q969K3 372 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 MYEOVQ96EZ4 313 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 PPP1R13BQ96KQ4 1090 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 GBP4Q96PP9 640 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 CPXM1Q96SM3 734 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 TRIM62Q9BVG3 475 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 GTPBP2Q9BX10 602 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 NUSAP1Q9BXS6 441 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 MKRN2Q9H000 416 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 POPDC2Q9HBU9 364 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 CD248Q9HCU0 757 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 TMEM9BQ9NQ34 198 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 SAMSN1Q9NSI8 373 aaKnown RBP16.37■□□□□ 0.21
TTC38-205ENST00000451998 LMBRD1Q9NUN5 540 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 STOML2Q9UJZ1 356 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 TLR6Q9Y2C9 796 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 DCHS1Q96JQ0 3298 aa16.37■□□□□ 0.21
TTC38-205ENST00000451998 DNAH14Q0VDD8 3507 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 MYO18AQ92614 2054 aaKnown RBP16.36■□□□□ 0.21
TTC38-205ENST00000451998 MEI4A8MW99 385 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 FOXN3O00409 490 aaPredicted RBP16.36■□□□□ 0.21
TTC38-205ENST00000451998 TRUB2O95900 331 aaKnown RBP16.36■□□□□ 0.21
TTC38-205ENST00000451998 ERCC5P28715 1186 aaPredicted RBP16.36■□□□□ 0.21
TTC38-205ENST00000451998 YWHAZP63104 245 aaKnown RBP16.36■□□□□ 0.21
TTC38-205ENST00000451998 RING1Q06587 406 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 ZNF33AQ06730 810 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 MIIPQ5JXC2 388 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 TMPRSS6Q8IU80 811 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 AHI1Q8N157 1196 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 STK32AQ8WU08 396 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 SIPA1Q96FS4 1042 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 NOX5Q96PH1 765 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 PLA2G4CQ9UP65 541 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 NFE2L3Q9Y4A8 694 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 CEP83Q9Y592 693 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
TTC38-205ENST00000451998 THADAQ6YHU6 1953 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 NPC1O15118 1278 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 IRAK2O43187 625 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 ERBB2P04626 1255 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 POLR2EP19388 210 aaKnown RBP16.35■□□□□ 0.21
TTC38-205ENST00000451998 CD6P30203 668 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 RPL34P49207 117 aaKnown RBP16.35■□□□□ 0.21
TTC38-205ENST00000451998 ATXN3P54252 364 aaPredicted RBP16.35■□□□□ 0.21
TTC38-205ENST00000451998 MEA1Q16626 185 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 DAB2IPQ5VWQ8 1189 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 PSAPL1Q6NUJ1 521 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 MMS22LQ6ZRQ5 1243 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 FAM183BPQ6ZVS7 135 aa16.35■□□□□ 0.21
TTC38-205ENST00000451998 TMEM110Q86TL2 294 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms