RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 PBX3P40426 434 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 MSH2P43246 934 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 YWHAGP61981 247 aaKnown RBP eCLIP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 CBLBQ13191 982 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 NUGGCQ68CJ6 796 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 CCDC121Q6ZUS5 278 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 BZW1Q7L1Q6 419 aaKnown RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 SPATA2LQ8IUW3 424 aaPredicted RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 TFB1MQ8WVM0 346 aaKnown RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 FGFR1OP2Q9NVK5 253 aa16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 SMG5Q9UPR3 1016 aaKnown RBP16.62■□□□□ 0.25
AP000253.1-201ENST00000449339 GOLGA6L7A0A1B0GV03 622 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 A0A1W2PPM1 405 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 CREB3O43889 395 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 DGKIO75912 1065 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 PAX3P23760 479 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 LIG3P49916 1009 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 SLC18A1P54219 525 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 WDR4P57081 412 aaKnown RBP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 SF3A3Q12874 501 aaKnown RBP eCLIP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 CAND1Q86VP6 1230 aaKnown RBP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 CEP57Q86XR8 500 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 HTR3CQ8WXA8 447 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 SEPT8Q92599 483 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 MAGEB18Q96M61 343 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 TGS1Q96RS0 853 aaKnown RBP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 PRDM16Q9HAZ2 1276 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 WDR6Q9NNW5 1121 aaKnown RBP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 NR2E3Q9Y5X4 410 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 PATJQ8NI35 1801 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM72CH0Y354 149 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 H3BRJ5 948 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 TMEM189-UBE2V1I3L0A0 370 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 PITPNM1O00562 1244 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 MFSD11O43934 449 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 SPAG6O75602 509 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 KRT4P19013 534 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 GRIK1P39086 918 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 PGFP49763 221 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 IL9RQ01113 521 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM72AQ5TYM5 149 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 SDHAF4Q5VUM1 108 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM72DQ6L9T8 149 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM72BQ86X60 149 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 DENND1AQ8TEH3 1009 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 DCAKDQ8WVC6 231 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 SLC9A7Q96T83 725 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 LGMNQ99538 433 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 DDIT4Q9NX09 232 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 LRFN2Q9ULH4 789 aa16.61■□□□□ 0.25
AP000253.1-201ENST00000449339 ARHGEF37A1IGU5 675 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 HACD1B0YJ81 288 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 NT5C1B-RDH14C9J2C7 533 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 ASMTLO95671 621 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 ITIH4Q14624 930 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 MAPRE1Q15691 268 aaKnown RBP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 KBTBD12Q3ZCT8 623 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 PM20D1Q6GTS8 502 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 DEFB128Q7Z7B8 93 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 SCN4BQ8IWT1 228 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 MCUQ8NE86 351 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 PAIP2Q9BPZ3 127 aaKnown RBP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 GPR62Q9BZJ7 368 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 RASSF4Q9H2L5 321 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 SNX10Q9Y5X0 201 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 TYROBPO43914 113 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 SNX3O60493 162 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 OAZ2O95190 189 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 CA4P22748 312 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 CYP2C18P33260 490 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 RPA3P35244 121 aaPredicted RBP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 ADRA1BP35368 520 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 GPR15P49685 360 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 MNX1P50219 401 aaPredicted RBP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 SLC5A3P53794 718 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 VARS2Q5ST30 1063 aaKnown RBP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM171A1Q5VUB5 890 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 RFX8Q6ZV50 586 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 PGLYRP2Q96PD5 576 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 ZCWPW1Q9H0M4 648 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 HIPK3Q9H422 1215 aa16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 ELAC1Q9H777 363 aaKnown RBP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP000253.1-201ENST00000449339 EEF2KO00418 725 aaKnown RBP16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 COL6A1P12109 1028 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 VAV1P15498 845 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 TPSB2P20231 275 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 SLC11A1P49279 550 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 AIF1P55008 147 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 TPSAB1Q15661 275 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 C4orf50Q6ZRC1 276 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 TAC4Q86UU9 113 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 MZB1Q8WU39 189 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 NTAN1Q96AB6 310 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 CFAP36Q96G28 342 aa16.59■□□□□ 0.25
AP000253.1-201ENST00000449339 BEGAINQ9BUH8 593 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms