RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 CDKL1Q00532 357 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 RAB6CQ53S08 254 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 OR6B2Q6IFH4 312 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 CAND1Q86VP6 1230 aaKnown RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PKP2Q99959 881 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 FRMD8P1Q9BZ68 369 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 SENP6Q9GZR1 1112 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 RAB6CQ9H0N0 254 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 EPB41L1Q9H4G0 881 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 BCAP29Q9UHQ4 241 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 ZNF180Q9UJW8 692 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 CNTNAP1P78357 1384 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 WDR27A2RRH5 827 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 ADCY6O43306 1168 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 DENRO43583 198 aaKnown RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PEX10O60683 326 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 DGAT1O75907 488 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 LSM8O95777 96 aaKnown RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 FGF3P11487 239 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PDGFRAP16234 1089 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 CDH2P19022 906 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PTPN7P35236 360 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 TNFSF9P41273 254 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 GABRB2P47870 512 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 ENTPD1P49961 510 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 SERPINB9P50453 376 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 ABCE1P61221 599 aaKnown RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 MPP3Q13368 585 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 ZNF699Q32M78 642 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 SLC9B1Q4ZJI4 515 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PATL1Q86TB9 770 aaKnown RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 SAMD3Q8N6K7 520 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 CATSPER1Q8NEC5 780 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 CPXM1Q96SM3 734 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 PAIP1Q9H074 479 aaKnown RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 ZNF277Q9NRM2 450 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 C20orf96Q9NUD7 363 aaPredicted RBP12.15□□□□□ -0.46
TRAK1-206ENST00000449246 RAB26Q9ULW5 256 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 FIS1Q9Y3D6 152 aa12.15□□□□□ -0.46
TRAK1-206ENST00000449246 GLRA3O75311 464 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 ITGBL1O95965 494 aaPredicted RBP12.14□□□□□ -0.47
TRAK1-206ENST00000449246 ATP5BP06576 529 aaKnown RBP12.14□□□□□ -0.47
TRAK1-206ENST00000449246 CPA3P15088 417 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 EPHA3P29320 983 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 CDH15P55291 814 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 YWHAEP62258 255 aaKnown RBP12.14□□□□□ -0.47
TRAK1-206ENST00000449246 PRKCEQ02156 737 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 MAVSQ7Z434 540 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 CLVS1Q8IUQ0 354 aaPredicted RBP12.14□□□□□ -0.47
TRAK1-206ENST00000449246 AHI1Q8N157 1196 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 ZNF781Q8N8C0 355 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 UBA3Q8TBC4 463 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 GRIN3AQ8TCU5 1115 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 RCN3Q96D15 328 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 TMEM79Q9BSE2 394 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 DHX35Q9H5Z1 703 aaKnown RBP12.14□□□□□ -0.47
TRAK1-206ENST00000449246 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 PXMP2Q9NR77 195 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 ASNSD1Q9NWL6 643 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 TMEM216Q9P0N5 145 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 HMX2A2RU54 273 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 PLIN3O60664 434 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 LYPLA2O95372 231 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 MX2P20592 715 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 ADORA2AP29274 412 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 SFNP31947 248 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 ABCD1P33897 745 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 TUBB3Q13509 450 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 NOMO1Q15155 1222 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 CMC1Q7Z7K0 106 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 DSELQ8IZU8 1212 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 NUP93Q8N1F7 819 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 MYO1HQ8N1T3 1032 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 NETO2Q8NC67 525 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 MAML3Q96JK9 1138 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 CGRRF1Q99675 332 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 NIF3L1Q9GZT8 377 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 STK39Q9UEW8 545 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 EFR3BQ9Y2G0 817 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 SNX13Q9Y5W8 968 aa12.14□□□□□ -0.47
TRAK1-206ENST00000449246 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
TRAK1-206ENST00000449246 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 THRAP10827 490 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 ESRRGP62508 458 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 ADGRE1Q14246 886 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 ZBTB8BQ8NAP8 495 aaPredicted RBP12.13□□□□□ -0.47
TRAK1-206ENST00000449246 TMEM174Q8WUU8 243 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 ATG4CQ96DT6 458 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 ZNF512Q96ME7 567 aaPredicted RBP12.13□□□□□ -0.47
TRAK1-206ENST00000449246 EBNA1BP2Q99848 306 aaKnown RBP12.13□□□□□ -0.47
TRAK1-206ENST00000449246 NTPCRQ9BSD7 190 aaKnown RBP12.13□□□□□ -0.47
TRAK1-206ENST00000449246 CEP41Q9BYV8 373 aa12.13□□□□□ -0.47
TRAK1-206ENST00000449246 SEPT10Q9P0V9 454 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms