RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TCEA3O75764 348 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TOMM70O94826 608 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 USP17L7P0C7H9 530 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 GOT1P17174 413 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 SP100P23497 879 aaPredicted RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 IFRD2Q12894 506 aaPredicted RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 STAT4Q14765 748 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 MUM1Q2TAK8 710 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 WASHC2DQ5SRD0 308 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 FAXCQ5TGI0 409 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 SYPL2Q5VXT5 272 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 CCSAPQ6IQ19 270 aaPredicted RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 CTU1Q7Z7A3 348 aaKnown RBP14.62□□□□□ -0.07
LIMD1-202ENST00000440097 PDIK1LQ8N165 341 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 SLC7A14Q8TBB6 771 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 TMPRSS4Q9NRS4 437 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 DLGAP2Q9P1A6 1054 aa14.62□□□□□ -0.07
LIMD1-202ENST00000440097 RASA4BC9J798 803 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 RASA4O43374 803 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 ALDH3A1P30838 453 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 SCNN1AP37088 669 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 GBE1Q04446 702 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 DEUP1Q05D60 604 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 DPYSL2Q16555 572 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 RNF220Q5VTB9 566 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 HFE2Q6ZVN8 426 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 STRADAQ7RTN6 431 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 POPDC2Q9HBU9 364 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 CDH9Q9ULB4 789 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 FARP1Q9Y4F1 1045 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-202ENST00000440097 FAM47DPA6NHR8 397 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 ZNF623O75123 536 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 PIAS1O75925 651 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 NCAM1P13591 858 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 AMPD1P23109 780 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 CST5P28325 142 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-202ENST00000440097 NOS2P35228 1153 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 SESN3P58005 492 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 FNBP1LQ5T0N5 605 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 MRPL10Q7Z7H8 261 aaKnown RBP14.61□□□□□ -0.07
LIMD1-202ENST00000440097 PALM2Q8IXS6 379 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 GALNT15Q8N3T1 639 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 UCMAQ8WVF2 138 aa14.61□□□□□ -0.07
LIMD1-202ENST00000440097 CENPIQ92674 756 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-202ENST00000440097 KCTD15Q96SI1 283 aaPredicted RBP14.61□□□□□ -0.07
LIMD1-202ENST00000440097 NRP1O14786 923 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 TMEM63AO94886 807 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 RPL34P49207 117 aaKnown RBP14.6□□□□□ -0.07
LIMD1-202ENST00000440097 CACNA2D1P54289 1103 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 GPRIN1Q7Z2K8 1008 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 RELL1Q8IUW5 271 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 NAT8LQ8N9F0 302 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 CSPG4P5Q96PW8 444 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 SMOQ99835 787 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 YJEFN3A6XGL0 299 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 F8W810 466 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 DAB1O75553 588 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 DCTN3O75935 186 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 CABYRO75952 493 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 RTN3O95197 1032 aaPredicted RBP14.6□□□□□ -0.07
LIMD1-202ENST00000440097 ASMTLO95671 621 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 APRTP07741 180 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 BDNFP23560 247 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 SSTR1P30872 391 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 TUSC3Q13454 348 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 SLC9A4Q6AI14 798 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 ARCQ7LC44 396 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 APLFQ8IW19 511 aaPredicted RBP14.6□□□□□ -0.07
LIMD1-202ENST00000440097 NETO2Q8NC67 525 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 FBXO36Q8NEA4 188 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 CCDC110Q8TBZ0 833 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 EDEM1Q92611 657 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 MYLPFQ96A32 169 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 SMARCD1Q96GM5 515 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 C11orf84Q9BUA3 381 aaPredicted RBP14.6□□□□□ -0.07
LIMD1-202ENST00000440097 STARD7Q9NQZ5 370 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 NMRK1Q9NWW6 199 aa14.6□□□□□ -0.07
LIMD1-202ENST00000440097 ALOX15BO15296 676 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 CKBP12277 381 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 KRT15P19012 456 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 NKX3-2P78367 333 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 MSS51Q4VC12 460 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 GLB1LQ6UWU2 654 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 KCTD13Q8WZ19 329 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 FAM136AQ96C01 138 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 ZNF333Q96JL9 665 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 TMEM30AQ9NV96 361 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 PAK5Q9P286 719 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 CHMP2BQ9UQN3 213 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 F5H423 210 aaPredicted RBP14.59□□□□□ -0.07
LIMD1-202ENST00000440097 NVLO15381 856 aaKnown RBP14.59□□□□□ -0.07
LIMD1-202ENST00000440097 ITGB1P05556 798 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 FAM163BP0C2L3 166 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 SKIP12755 728 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 ZFXP17010 805 aaPredicted RBP14.59□□□□□ -0.07
LIMD1-202ENST00000440097 PHBP35232 272 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 EFHC2Q5JST6 749 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 OVOS1Q6IE37 1185 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 RFWD3Q6PCD5 774 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms