RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 FAM72CH0Y354 149 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 M0QZQ0 153 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 LTFP02788 710 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 MT-ND3P03897 115 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 INHBAP08476 426 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 PCSK1P29120 753 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 CD52P31358 61 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 FLT3LGP49771 235 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 NCALDP61601 193 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 LPIN1Q14693 890 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 PDK1Q15118 436 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 FAM72AQ5TYM5 149 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 TTC39BQ5VTQ0 682 aaPredicted RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 FAM72DQ6L9T8 149 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 DSTYKQ6XUX3 929 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 DENND5BQ6ZUT9 1274 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 FAM47EQ6ZV65 393 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 FAM72BQ86X60 149 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 GSDMBQ8TAX9 411 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 LRRC8CQ8TDW0 803 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 C10orf82Q8WW14 230 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 P2RY11Q96G91 374 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 SMARCD1Q96GM5 515 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 OXNAD1Q96HP4 312 aaPredicted RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 KLF6Q99612 283 aaPredicted RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 C12orf65Q9H3J6 166 aaKnown RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 RRN3Q9NYV6 651 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 MOCS1Q9NZB8 636 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 IGSF9Q9P2J2 1179 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 PCDHA11Q9Y5I1 949 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 RAD54BQ9Y620 910 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 HMX2A2RU54 273 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 RNF103O00237 685 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 ASGR1P07306 291 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 CSH1P0DML2 217 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 CSH2P0DML3 217 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 EIF4EBP2Q13542 120 aaPredicted RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 LRRC8BQ6P9F7 803 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 TRMT10BQ6PF06 316 aaKnown RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 OTOAQ7RTW8 1153 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 ZNF598Q86UK7 904 aaKnown RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 TP53INP2Q8IXH6 220 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 COLGALT1Q8NBJ5 622 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 SLC7A14Q8TBB6 771 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 IRGQQ8WZA9 623 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 APBB2Q92870 758 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 MYLPFQ96A32 169 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 GORASP1Q9BQQ3 440 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 TRIM56Q9BRZ2 755 aaKnown RBP14.39□□□□□ -0.11
HOXC4-202ENST00000430889 PRDM12Q9H4Q4 367 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 SPC25Q9HBM1 224 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
HOXC4-202ENST00000430889 H0YHG0 523 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 GOLGA8RI6L899 631 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 EEF2KO00418 725 aaKnown RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 RFPL1O75677 317 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 ZNF189O75820 626 aaPredicted RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 IL1BP01584 269 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 IGLV3-25P01717 112 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 SNRPAP09012 282 aaKnown RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 ODC1P11926 461 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 PAX3P23760 479 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 GBP2P32456 591 aaPredicted RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 CXCR3P49682 368 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 GRIK3Q13003 919 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 NME3Q13232 169 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 KCNA10Q16322 511 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 FAM133BQ5BKY9 247 aaKnown RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 INTS6LQ5JSJ4 861 aaKnown RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 CTU1Q7Z7A3 348 aaKnown RBP14.38□□□□□ -0.11
HOXC4-202ENST00000430889 ZNF567Q8N184 647 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 PPM1NQ8N819 430 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 CCDC63Q8NA47 563 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 ARNTL2Q8WYA1 636 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 DPF3Q92784 378 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 TMLHEQ9NVH6 421 aa14.38□□□□□ -0.11
HOXC4-202ENST00000430889 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 NUP205Q92621 2012 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 SYNJ2BP-COX16A0A087WUM0 186 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 TRIM49D1C9J1S8 452 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 PPP1R12AO14974 1030 aaPredicted RBP14.37□□□□□ -0.11
HOXC4-202ENST00000430889 CREB3O43889 395 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 UGT1A9O60656 530 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 LPXNO60711 386 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 PYGBP11216 843 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 ERCC2P18074 760 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 THPOP40225 353 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 PRKCZQ05513 592 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 NIPAL4Q0D2K0 466 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 PARP6Q2NL67 630 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 ARTNQ5T4W7 220 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 TIFABQ6ZNK6 161 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 ASRGL1Q7L266 308 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms