RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 FBRSL1Q9HCM7 1045 aaKnown RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 DEC1Q9P2X7 70 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 TCRBV5S1A1TA0A578 114 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 TYW5A2RUC4 315 aaKnown RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 TBC1D3BA6NDS4 549 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 TMEM110-MUSTN1A8MSY1 372 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 F5H5T6 163 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 NCAM2O15394 837 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 CCP110O43303 1012 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 SRGAP2O75044 1071 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 RNF8O76064 485 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 TACR2P21452 398 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 TARSP26639 723 aaKnown RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 SLC6A4P31645 630 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 PTPN9P43378 593 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 MRE11P49959 708 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 GSCP56915 257 aaPredicted RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 OGDHQ02218 1023 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 PPP2R5DQ14738 602 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 ARL13BQ3SXY8 428 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 BRMS1LQ5PSV4 323 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 PPP1R15BQ5SWA1 713 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 OTUD1Q5VV17 481 aaPredicted RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 BTBD6Q96KE9 485 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 PNKPQ96T60 521 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 LTB4R2Q9NPC1 389 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 ARHGEF4Q9NR80 690 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 RBM12Q9NTZ6 932 aaKnown RBP15.09■□□□□ 0.01
SGCE-204ENST00000428696 PCSK1NQ9UHG2 260 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 ANAPC7Q9UJX3 599 aa15.09■□□□□ 0.01
SGCE-204ENST00000428696 HOXC11O43248 304 aaPredicted RBP15.08■□□□□ 0
SGCE-204ENST00000428696 PI15O43692 258 aa15.08■□□□□ 0
SGCE-204ENST00000428696 LATS1O95835 1130 aa15.08■□□□□ 0
SGCE-204ENST00000428696 CYP1A2P05177 515 aa15.08■□□□□ 0
SGCE-204ENST00000428696 SEC13P55735 322 aa15.08■□□□□ 0
SGCE-204ENST00000428696 GSDMDP57764 484 aa15.08■□□□□ 0
SGCE-204ENST00000428696 RPS24P62847 133 aaKnown RBP15.08■□□□□ 0
SGCE-204ENST00000428696 FAM133BQ5BKY9 247 aaKnown RBP15.08■□□□□ 0
SGCE-204ENST00000428696 MS4A13Q5J8X5 152 aa15.08■□□□□ 0
SGCE-204ENST00000428696 ASTLQ6HA08 431 aaPredicted RBP15.08■□□□□ 0
SGCE-204ENST00000428696 C1orf228Q6PIY5 440 aa15.08■□□□□ 0
SGCE-204ENST00000428696 STRADAQ7RTN6 431 aa15.08■□□□□ 0
SGCE-204ENST00000428696 C12orf40Q86WS4 652 aa15.08■□□□□ 0
SGCE-204ENST00000428696 CPXM2Q8N436 756 aa15.08■□□□□ 0
SGCE-204ENST00000428696 CARNMT1Q8N4J0 409 aa15.08■□□□□ 0
SGCE-204ENST00000428696 FBXL6Q8N531 539 aa15.08■□□□□ 0
SGCE-204ENST00000428696 AZIN2Q96A70 460 aa15.08■□□□□ 0
SGCE-204ENST00000428696 MSANTD3Q96H12 275 aa15.08■□□□□ 0
SGCE-204ENST00000428696 RPRD1AQ96P16 312 aaPredicted RBP15.08■□□□□ 0
SGCE-204ENST00000428696 VANGL2Q9ULK5 521 aa15.08■□□□□ 0
SGCE-204ENST00000428696 EPN1Q9Y6I3 576 aaPredicted RBP15.08■□□□□ 0
SGCE-204ENST00000428696 TICRRQ7Z2Z1 1910 aa15.07■□□□□ 0
SGCE-204ENST00000428696 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.07■□□□□ 0
SGCE-204ENST00000428696 MYO1FO00160 1098 aa15.07■□□□□ 0
SGCE-204ENST00000428696 TRIM24O15164 1050 aa15.07■□□□□ 0
SGCE-204ENST00000428696 TULP3O75386 442 aa15.07■□□□□ 0
SGCE-204ENST00000428696 EGFP01133 1207 aa15.07■□□□□ 0
SGCE-204ENST00000428696 APODP05090 189 aa15.07■□□□□ 0
SGCE-204ENST00000428696 ADRA1BP35368 520 aa15.07■□□□□ 0
SGCE-204ENST00000428696 OPRD1P41143 372 aa15.07■□□□□ 0
SGCE-204ENST00000428696 NOP2P46087 812 aaKnown RBP15.07■□□□□ 0
SGCE-204ENST00000428696 DGKGP49619 791 aa15.07■□□□□ 0
SGCE-204ENST00000428696 SGSHP51688 502 aa15.07■□□□□ 0
SGCE-204ENST00000428696 MLLT6P55198 1093 aaPredicted RBP15.07■□□□□ 0
SGCE-204ENST00000428696 HDAC4P56524 1084 aa15.07■□□□□ 0
SGCE-204ENST00000428696 AUHQ13825 339 aaKnown RBP15.07■□□□□ 0
SGCE-204ENST00000428696 GSE1Q14687 1217 aa15.07■□□□□ 0
SGCE-204ENST00000428696 PIK3R6Q5UE93 754 aa15.07■□□□□ 0
SGCE-204ENST00000428696 GRAMD4Q6IC98 578 aa15.07■□□□□ 0
SGCE-204ENST00000428696 LRRC31Q6UY01 552 aa15.07■□□□□ 0
SGCE-204ENST00000428696 NUDT18Q6ZVK8 323 aa15.07■□□□□ 0
SGCE-204ENST00000428696 CIR1Q86X95 450 aaPredicted RBP15.07■□□□□ 0
SGCE-204ENST00000428696 PJA1Q8NG27 643 aa15.07■□□□□ 0
SGCE-204ENST00000428696 MYEOVQ96EZ4 313 aa15.07■□□□□ 0
SGCE-204ENST00000428696 PGAP3Q96FM1 320 aaPredicted RBP15.07■□□□□ 0
SGCE-204ENST00000428696 LUC7LQ9NQ29 371 aaKnown RBP15.07■□□□□ 0
SGCE-204ENST00000428696 ANLNQ9NQW6 1124 aa15.07■□□□□ 0
SGCE-204ENST00000428696 TFR2Q9UP52 801 aa15.07■□□□□ 0
SGCE-204ENST00000428696 PCDHA13Q9Y5I0 950 aa15.07■□□□□ 0
SGCE-204ENST00000428696 HS3ST4Q9Y661 456 aa15.07■□□□□ 0
SGCE-204ENST00000428696 HELZP42694 1942 aaKnown RBP15.06■□□□□ 0
SGCE-204ENST00000428696 H0Y626 953 aa15.06■□□□□ 0
SGCE-204ENST00000428696 GPR37L1O60883 481 aa15.06■□□□□ 0
SGCE-204ENST00000428696 ENDOD1O94919 500 aa15.06■□□□□ 0
SGCE-204ENST00000428696 KAT7O95251 611 aa15.06■□□□□ 0
SGCE-204ENST00000428696 NDUFA10O95299 355 aa15.06■□□□□ 0
SGCE-204ENST00000428696 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
SGCE-204ENST00000428696 TMEM253P0C7T8 217 aa15.06■□□□□ 0
SGCE-204ENST00000428696 NUMBP49757 651 aa15.06■□□□□ 0
SGCE-204ENST00000428696 CLCN5P51795 746 aa15.06■□□□□ 0
SGCE-204ENST00000428696 COL4A3Q01955 1670 aa15.06■□□□□ 0
SGCE-204ENST00000428696 MTA1Q13330 715 aa15.06■□□□□ 0
SGCE-204ENST00000428696 EIF4EBP2Q13542 120 aaPredicted RBP15.06■□□□□ 0
SGCE-204ENST00000428696 GAB4Q2WGN9 574 aa15.06■□□□□ 0
SGCE-204ENST00000428696 PREPLQ4J6C6 727 aaPredicted RBP15.06■□□□□ 0
SGCE-204ENST00000428696 RABGAP1LQ5R372 815 aa15.06■□□□□ 0
SGCE-204ENST00000428696 C10orf76Q5T2E6 689 aa15.06■□□□□ 0
SGCE-204ENST00000428696 FYB2Q5VWT5 728 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms