RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 GOT1P17174 413 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 AOC1P19801 751 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ADORA2BP29275 332 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 CRABP2P29373 138 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ATICP31939 592 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 L1CAMP32004 1257 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 MED21Q13503 144 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 OLIG2Q13516 323 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 PDPK2PQ6A1A2 396 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 OLFML1Q6UWY5 402 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ATG14Q6ZNE5 492 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GADL1Q6ZQY3 521 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 DHDDSQ86SQ9 333 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 FAM131BQ86XD5 332 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 FBXO16Q8IX29 292 aaPredicted RBP7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 HACE1Q8IYU2 909 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 NME8Q8N427 588 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 COLGALT1Q8NBJ5 622 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 OR6Y1Q8NGX8 325 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 GDPD5Q8WTR4 605 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 AGAP3Q96P47 875 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 MOCS1Q9NZB8 636 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 ADAMTS6Q9UKP5 1117 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 AP4E1Q9UPM8 1137 aa7.75□□□□□ -1.17
SMARCC1-202ENST00000425518 IGKV6-21A0A0C4DH24 114 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GLRA3O75311 464 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PEX2P28328 305 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 RAB27AP51159 221 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 STILQ15468 1287 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 RNF111Q6ZNA4 994 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PHTF2Q8N3S3 785 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 HTR3CQ8WXA8 447 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 APBB2Q92870 758 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 KHSRPQ92945 711 aaKnown RBP eCLIP7.74□□□□□ -1.174e-7■■■□□ 17.4
SMARCC1-202ENST00000425518 KLRG1Q96E93 195 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MOCOSQ96EN8 888 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TBCBQ99426 244 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF670Q9BS34 389 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GPAMQ9HCL2 828 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PRMT7Q9NVM4 692 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 DDX43Q9NXZ2 648 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 DTLQ9NZJ0 730 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ZNF112Q9UJU3 913 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GOLGA8QA0A0J9YX86 632 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 A0A1B0GVG6 124 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GOLGA8OA6NCC3 632 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GOLGA8NF8WBI6 632 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 BUD23O43709 281 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GAS2O43903 313 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 USP12O75317 370 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ITGA2BP08514 1039 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 RAG1P15918 1043 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ARF4P18085 180 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 SAT1P21673 171 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MSX2P35548 267 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 AQP4P55087 323 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TUBB3Q13509 450 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PPP2R5DQ14738 602 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MMEL1Q495T6 779 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CELF3Q5SZQ8 465 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GJC2Q5T442 439 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MAVSQ7Z434 540 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ST13P4Q8IZP2 240 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CCDC185Q8N715 623 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 RAB3IL1Q8TBN0 382 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TFB1MQ8WVM0 346 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 NDRG1Q92597 394 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 AZIN2Q96A70 460 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 FAM149B1Q96BN6 582 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CSPG4P5Q96PW8 444 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 KCTD15Q96SI1 283 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 OXCT2Q9BYC2 517 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 SPATC1LQ9H0A9 340 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 C1orf21Q9H246 121 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MKS1Q9NXB0 559 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 GGA3Q9NZ52 723 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 DCDC2Q9UHG0 476 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PPEF2O14830 753 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 AIM2O14862 343 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 HSPA4LO95757 839 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TXNP10599 105 aaKnown RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 INSRRP14616 1297 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CPA3P15088 417 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TPSB2P20231 275 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ARRB2P32121 409 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MAGEA3P43357 314 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 MAGEA6P43360 314 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 ATXN3P54252 364 aaPredicted RBP7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 INHBEP58166 350 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TNFAIP2Q03169 654 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CCNIQ14094 377 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 PCLAFQ15004 111 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TPSAB1Q15661 275 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CNPY1Q3B7I2 92 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 LBX2Q6XYB7 198 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 TIFABQ6ZNK6 161 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 EXOC8Q8IYI6 725 aa7.74□□□□□ -1.17
SMARCC1-202ENST00000425518 CXorf38Q8TB03 319 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms