RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PDGFRBP09619 1106 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 GIMD1P0DJR0 217 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 LIPCP11150 499 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 PLA2G4AP47712 749 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF131P52739 623 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 SLC12A3P55017 1021 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 KCNAB2Q13303 367 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 EIF3IQ13347 325 aaKnown RBP9.46□□□□□ -0.9
TRIM39-206ENST00000420746 POSTNQ15063 836 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 FNDC3BQ53EP0 1204 aaKnown RBP9.46□□□□□ -0.9
TRIM39-206ENST00000420746 HYIQ5T013 277 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 C14orf80Q86SX3 495 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 BRSK2Q8IWQ3 736 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 SCAMP5Q8TAC9 235 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 WDR48Q8TAF3 677 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 WFIKKN2Q8TEU8 576 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 SSC4DQ8WTU2 575 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 APOLD1Q96LR9 279 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 FBXO44Q9H4M3 255 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 TLR8Q9NR97 1041 aaKnown RBP9.46□□□□□ -0.9
TRIM39-206ENST00000420746 CUEDC1Q9NWM3 386 aaPredicted RBP9.46□□□□□ -0.9
TRIM39-206ENST00000420746 FBXL12Q9NXK8 326 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 NCKIPSDQ9NZQ3 722 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 SEPT10Q9P0V9 454 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 SUN2Q9UH99 717 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 DMTF1Q9Y222 760 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 CYP46A1Q9Y6A2 500 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 U3KQA8 63 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 CSMD1Q96PZ7 3565 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 SETD2Q9BYW2 2564 aaPredicted RBP9.46□□□□□ -0.9
TRIM39-206ENST00000420746 ZFHX3Q15911 3703 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 FBN3Q75N90 2809 aa9.46□□□□□ -0.9
TRIM39-206ENST00000420746 COL27A1Q8IZC6 1860 aaPredicted RBP9.45□□□□□ -0.9
TRIM39-206ENST00000420746 ANKRD63C9JTQ0 380 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 PFKFB2O60825 505 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 TACC1O75410 805 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 AGFG2O95081 481 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 CTDNEP1O95476 244 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 KRT19P08727 400 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 FDPSP14324 419 aaKnown RBP9.45□□□□□ -0.9
TRIM39-206ENST00000420746 PTPN1P18031 435 aaKnown RBP9.45□□□□□ -0.9
TRIM39-206ENST00000420746 TGM2P21980 687 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 TRIM29Q14134 588 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF174Q15697 407 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 TMC6Q7Z403 805 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 CPXM2Q8N436 756 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 IFI44Q8TCB0 444 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 GANCQ8TET4 914 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 MMTAG2Q9BU76 263 aaKnown RBP9.45□□□□□ -0.9
TRIM39-206ENST00000420746 ST6GALNAC4Q9H4F1 302 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 DMAP1Q9NPF5 467 aaPredicted RBP9.45□□□□□ -0.9
TRIM39-206ENST00000420746 SERGEFQ9UGK8 458 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 PLAAQ9Y263 795 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 R3HCC1Q9Y3T6 440 aaKnown RBP9.45□□□□□ -0.9
TRIM39-206ENST00000420746 CACNA1DQ01668 2161 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 ATP8B3O60423 1300 aa9.45□□□□□ -0.9
TRIM39-206ENST00000420746 MYH10P35580 1976 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 NEMP2A6NFY4 417 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 RNASEH1O60930 286 aaKnown RBP9.44□□□□□ -0.9
TRIM39-206ENST00000420746 STC2O76061 302 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 TBX18O95935 607 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 SLC5A2P31639 672 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 GNL1P36915 607 aaPredicted RBP9.44□□□□□ -0.9
TRIM39-206ENST00000420746 WNT7BP56706 349 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 GNL2Q13823 731 aaKnown RBP9.44□□□□□ -0.9
TRIM39-206ENST00000420746 MANEAQ5SRI9 462 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 FHL5Q5TD97 284 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 BORAQ6PGQ7 559 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 TADA2BQ86TJ2 420 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 ZNF276Q8N554 614 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRIM39-206ENST00000420746 HTR3CQ8WXA8 447 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 POMGNT1Q8WZA1 660 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 HPDLQ96IR7 371 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 FIZ1Q96SL8 496 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 KCNK16Q96T55 309 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 B3GNT5Q9BYG0 378 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 TM6SF1Q9BZW5 370 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 DCLK3Q9C098 648 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 NEUROG2Q9H2A3 272 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 SNX25Q9H3E2 840 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 PARVGQ9HBI0 331 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 KLHL11Q9NVR0 708 aa9.44□□□□□ -0.9
TRIM39-206ENST00000420746 A0A1W2PP55 124 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 PMS2P1A4D2B8 440 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 VPS37CA5D8V6 355 aaPredicted RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 TISP43B9A030 160 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 PLD2O14939 933 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 NVLO15381 856 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 RNASEH2AO75792 299 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 PIAS2O75928 621 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 LDHAP00338 332 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 KLKB1P03952 638 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 DLDP09622 509 aaKnown RBP9.43□□□□□ -0.9
TRIM39-206ENST00000420746 TMEM191BP0C7N4 346 aa9.43□□□□□ -0.9
TRIM39-206ENST00000420746 PLA2G4BP0C869 781 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms