RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CALB2P22676 271 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 RPL7AP62424 266 aaKnown RBP13.34□□□□□ -0.27
LINC00642-201ENST00000419459 BIRC2Q13490 618 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 PPP1R21Q6ZMI0 780 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 ADGRD2Q7Z7M1 963 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 XYLT1Q86Y38 959 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 PRELID2Q8N945 189 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 GIPC2Q8TF65 315 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 SLCO2A1Q92959 643 aa13.34□□□□□ -0.27
LINC00642-201ENST00000419459 LINGO3P0C6S8 592 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 ATP6V1C1P21283 382 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 KLRC2P26717 231 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 PEX19P40855 299 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 TKTL1P51854 596 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 SLC5A3P53794 718 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 USP46P62068 366 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 GPC5P78333 572 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 CALCOCO2Q13137 446 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 SEL1L2Q5TEA6 688 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 CCDC137Q6PK04 289 aaKnown RBP13.33□□□□□ -0.28
LINC00642-201ENST00000419459 SLC30A9Q6PML9 568 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 EMC1Q8N766 993 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
LINC00642-201ENST00000419459 FEZF2Q8TBJ5 459 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 PRCCQ92733 491 aaPredicted RBP13.33□□□□□ -0.28
LINC00642-201ENST00000419459 FUBP3Q96I24 572 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00642-201ENST00000419459 KLHL5Q96PQ7 755 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 NUP85Q9BW27 656 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 WHRNQ9P202 907 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 CTTNBP2NLQ9P2B4 639 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 STK38LQ9Y2H1 464 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 MTCL1Q9Y4B5 1905 aaKnown RBP13.33□□□□□ -0.28
LINC00642-201ENST00000419459 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
LINC00642-201ENST00000419459 LRRD1A4D1F6 860 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 USP17L7P0C7H9 530 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ABL2P42684 1182 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 UBE3AQ05086 875 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 RAB33AQ14088 237 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 FAM102AQ5T9C2 384 aaPredicted RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 OR6B2Q6IFH4 312 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 VSTM1Q6UX27 236 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 TMEM110Q86TL2 294 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ENDOVQ8N8Q3 282 aaKnown RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 STK32AQ8WU08 396 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ALG3Q92685 438 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 MCEEQ96PE7 176 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 LRRC4Q9HBW1 653 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 METTL5Q9NRN9 209 aaKnown RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 FNIP2Q9P278 1114 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 AFF4Q9UHB7 1163 aaKnown RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 IRAK3Q9Y616 596 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 PRRG1O14668 218 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 LPXNO60711 386 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 LMNAP02545 664 aaKnown RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ADH1AP07327 375 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ACADSP16219 412 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SLCO1A2P46721 670 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 PGFP49763 221 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 RASSF2P50749 326 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SMAD3P84022 425 aaKnown RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 CAV1Q03135 178 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SETDB1Q15047 1291 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 WASHC2DQ5SRD0 308 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SYDE1Q6ZW31 735 aaPredicted RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SIX6OS1Q8N1H7 587 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 KIF2BQ8N4N8 673 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 JOSD2Q8TAC2 188 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SLC7A14Q8TBB6 771 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 FAM161BQ96MY7 647 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ZNF576Q9H609 170 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 STK39Q9UEW8 545 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 LGALS13Q9UHV8 139 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 MAGED2Q9UNF1 606 aaPredicted RBP13.32□□□□□ -0.28
LINC00642-201ENST00000419459 ALG6Q9Y672 507 aa13.32□□□□□ -0.28
LINC00642-201ENST00000419459 TNFRSF10BO14763 440 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 HNRNPCL1O60812 293 aaKnown RBP13.31□□□□□ -0.28
LINC00642-201ENST00000419459 MTA2O94776 668 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 CALB1P05937 261 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 HAPLN1P10915 354 aaPredicted RBP13.31□□□□□ -0.28
LINC00642-201ENST00000419459 STX2P32856 288 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 GABRB2P47870 512 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 ROR2Q01974 943 aaKnown RBP13.31□□□□□ -0.28
LINC00642-201ENST00000419459 TSNAXIP1Q2TAA8 658 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 SMYD5Q6GMV2 418 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 DNAJC24Q6P3W2 148 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 HFE2Q6ZVN8 426 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 CPNE8Q86YQ8 564 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00642-201ENST00000419459 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms