RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.35■■□□□ 1.817e-8■■□□□ 11.5
VEGFA-208ENST00000417285 PRCCQ92733 491 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-208ENST00000417285 SIPA1Q96FS4 1042 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 HSPA12BQ96MM6 686 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 MED15Q96RN5 788 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 ST7Q9NRC1 585 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 WSB2Q9NYS7 404 aaPredicted RBP26.35■■□□□ 1.81
VEGFA-208ENST00000417285 USP36Q9P275 1121 aaKnown RBP26.35■■□□□ 1.81
VEGFA-208ENST00000417285 SUSD2Q9UGT4 822 aa26.35■■□□□ 1.81
VEGFA-208ENST00000417285 EPHX1P07099 455 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 HLA-FP30511 346 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 MTIF2P46199 727 aaKnown RBP26.34■■□□□ 1.81
VEGFA-208ENST00000417285 NNTQ13423 1086 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 SH3PXD2AQ5TCZ1 1133 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 PIK3R6Q5UE93 754 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 TRIM65Q6PJ69 517 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 AHI1Q8N157 1196 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 CADM4Q8NFZ8 388 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 CLEC4CQ8WTT0 213 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 ZNF606Q8WXB4 792 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 SORCS1Q8WY21 1168 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 SERPINB11Q96P15 392 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 CRACR2AQ9BSW2 395 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 CAPN10Q9HC96 672 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 NFE2L3Q9Y4A8 694 aa26.34■■□□□ 1.81
VEGFA-208ENST00000417285 LETM1O95202 739 aaPredicted RBP26.33■■□□□ 1.81
VEGFA-208ENST00000417285 FYNP06241 537 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 ATP5BP06576 529 aaKnown RBP26.33■■□□□ 1.81
VEGFA-208ENST00000417285 SYPP08247 313 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 ACADMP11310 421 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 GNSP15586 552 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 MAPK8P45983 427 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 CHST9Q7L1S5 443 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 RGL4Q8IZJ4 473 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 TOE1Q96GM8 510 aaKnown RBP26.33■■□□□ 1.81
VEGFA-208ENST00000417285 NUP58Q9BVL2 599 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 SLC4A5Q9BY07 1137 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 NUP62CLQ9H1M0 184 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 ABCB8Q9NUT2 735 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 DACH1Q9UI36 760 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 GGA2Q9UJY4 613 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 TLR6Q9Y2C9 796 aa26.33■■□□□ 1.81
VEGFA-208ENST00000417285 ATXN2Q99700 1313 aaKnown RBP26.33■■□□□ 1.81
VEGFA-208ENST00000417285 GTPBP10A4D1E9 387 aaKnown RBP26.32■■□□□ 1.8
VEGFA-208ENST00000417285 UPK3BL1B0FP48 263 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 UPK3BL2E5RIL1 263 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 TBL1XO60907 577 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 IGLV3-19P01714 112 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 PABPC1P11940 636 aaKnown RBP26.32■■□□□ 1.8
VEGFA-208ENST00000417285 PRKCHP24723 683 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 TPMTP51580 245 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 CAMK2GQ13555 558 aaPredicted RBP26.32■■□□□ 1.8
VEGFA-208ENST00000417285 EXOC3L4Q17RC7 722 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 DENND1BQ6P3S1 775 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 RFWD3Q6PCD5 774 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 TMEM110Q86TL2 294 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 ADIPOR2Q86V24 386 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 IRF2BP1Q8IU81 584 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 FAM114A1Q8IWE2 563 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 DQX1Q8TE96 717 aaKnown RBP26.32■■□□□ 1.8
VEGFA-208ENST00000417285 FAM149B1Q96BN6 582 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 TMEM245Q9H330 911 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 SLC32A1Q9H598 525 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 THAP9Q9H5L6 903 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 APEX2Q9UBZ4 518 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 PI4KAP42356 2102 aa26.32■■□□□ 1.8
VEGFA-208ENST00000417285 ARHGAP33O14559 1287 aa26.31■■□□□ 1.8
VEGFA-208ENST00000417285 DLDP09622 509 aaKnown RBP26.31■■□□□ 1.8
VEGFA-208ENST00000417285 SLC9A1P19634 815 aa26.31■■□□□ 1.8
VEGFA-208ENST00000417285 FNDC3BQ53EP0 1204 aaKnown RBP26.31■■□□□ 1.8
VEGFA-208ENST00000417285 FAM133BQ5BKY9 247 aaKnown RBP26.31■■□□□ 1.8
VEGFA-208ENST00000417285 HDDC3Q8N4P3 179 aa26.31■■□□□ 1.8
VEGFA-208ENST00000417285 HJURPQ8NCD3 748 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-208ENST00000417285 OR2T3Q8NH03 318 aa26.31■■□□□ 1.8
VEGFA-208ENST00000417285 FBRSQ9HAH7 460 aa26.31■■□□□ 1.8
VEGFA-208ENST00000417285 NAALADL1Q9UQQ1 740 aa26.31■■□□□ 1.8
VEGFA-208ENST00000417285 GOLGA6L7A0A1B0GV03 622 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 TYW5A2RUC4 315 aaKnown RBP26.3■■□□□ 1.8
VEGFA-208ENST00000417285 CAPN9O14815 690 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 THAP12O43422 761 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 C7P10643 843 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 POLR2EP19388 210 aaKnown RBP26.3■■□□□ 1.8
VEGFA-208ENST00000417285 GNA15P30679 374 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 COPAP53621 1224 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 YWHAZP63104 245 aaKnown RBP26.3■■□□□ 1.8
VEGFA-208ENST00000417285 MBLAC2Q68D91 279 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 CLEC17AQ6ZS10 378 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 CCDC117Q8IWD4 279 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-208ENST00000417285 FIBINQ8TAL6 211 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 DNASE2BQ8WZ79 361 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 SLC39A13Q96H72 371 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 FCRL2Q96LA5 508 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-208ENST00000417285 GTPBP2Q9BX10 602 aaKnown RBP26.3■■□□□ 1.8
VEGFA-208ENST00000417285 GPR174Q9BXC1 333 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 CD93Q9NPY3 652 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 SUN2Q9UH99 717 aa26.3■■□□□ 1.8
VEGFA-208ENST00000417285 GIPC1O14908 333 aa26.29■■□□□ 1.8
VEGFA-208ENST00000417285 ERCC5P28715 1186 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-208ENST00000417285 SLC6A4P31645 630 aa26.29■■□□□ 1.8
VEGFA-208ENST00000417285 MAN2A1Q16706 1144 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms