RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 SCAPQ12770 1279 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 TAF10Q12962 218 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 SEMA3BQ13214 749 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 PSMD5Q16401 504 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 USP41Q3LFD5 358 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 CENPUQ71F23 418 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 HOOK3Q86VS8 718 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 NPWQ8N729 165 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 TOP1MTQ969P6 601 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 ARMC5Q96C12 935 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 MRRFQ96E11 262 aaKnown RBP11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 IGSF21Q96ID5 467 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 QKIQ96PU8 341 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 PRDM12Q9H4Q4 367 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 VPS37BQ9H9H4 285 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 PAK5Q9P286 719 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 SCML2Q9UQR0 700 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 PTPRSQ13332 1948 aa11.02□□□□□ -0.65
SMPD4P1-201ENST00000416717 CFAP69A5D8W1 941 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 DCLK1O15075 740 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 TBC1D4O60343 1298 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 PIAS1O75925 651 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 METTL18O95568 372 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 TIMP1P01033 207 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 APRTP07741 180 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 HMBSP08397 361 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 DNAJB2P25686 324 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 MAGEA11P43364 429 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 IFI35P80217 286 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 EFEMP1Q12805 493 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 BTG3Q14201 252 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 CCDC38Q502W7 563 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 MON1AQ86VX9 555 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 MIB1Q86YT6 1006 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 DNAJC5GQ8N7S2 189 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 SPPL2BQ8TCT7 592 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 AUTS2Q8WXX7 1259 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 EXOC4Q96A65 974 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 CELF6Q96J87 481 aaKnown RBP11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 OLFM3Q96PB7 478 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 EPAS1Q99814 870 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 TRIM62Q9BVG3 475 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 SMOC2Q9H3U7 446 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 FBXO44Q9H4M3 255 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 TBK1Q9UHD2 729 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 KCNK1O00180 336 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 RGS16O15492 202 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 PAGE1O75459 146 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 CSPG5O95196 566 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 IGLV3-25P01717 112 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 HAPLN1P10915 354 aaPredicted RBP11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 AIF1P55008 147 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 ARL4CP56559 192 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 XRCC4Q13426 336 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 RASIP1Q5U651 963 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 NECAB2Q7Z6G3 386 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 HTR3CQ8WXA8 447 aa11.01□□□□□ -0.65
SMPD4P1-201ENST00000416717 KIAA1671Q9BY89 1806 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 COL4A4P53420 1690 aaPredicted RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ABHD14A-ACY1A0A1B0GW23 586 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZBBXA8MT70 800 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 RNF103O00237 685 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ATF6P18850 670 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 SSTR1P30872 391 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 CCR1P32246 355 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 CA8P35219 290 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 C1QTNF8P60827 252 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 WDR5P61964 334 aaKnown RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 KCNJ11Q14654 390 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 PAFAH1B3Q15102 231 aaKnown RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 PYROXD1Q8WU10 500 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 RTP4Q96DX8 246 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 P2RY11Q96G91 374 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 FCRL2Q96LA5 508 aaPredicted RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 FOXP3Q9BZS1 431 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 KLC2Q9H0B6 622 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 RABEP2Q9H5N1 569 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 CHMP2BQ9UQN3 213 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 E7EVH7 732 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 CAPN2P17655 700 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 RFC2P35250 354 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 EIF4EBP2Q13542 120 aaPredicted RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 AUHQ13825 339 aaKnown RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 PDK1Q15118 436 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ANKRD20A2Q5SQ80 823 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 C10orf120Q5SQS8 335 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ANKRD20A1Q5TYW2 823 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 AGBL2Q5U5Z8 902 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ANKRD20A3Q5VUR7 823 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 BZW1Q7L1Q6 419 aaKnown RBP11□□□□□ -0.65
SMPD4P1-201ENST00000416717 PDIK1LQ8N165 341 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 VPS52Q8N1B4 723 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 FBXO36Q8NEA4 188 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 TMEM169Q96HH4 297 aa11□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZNF558Q96NG5 402 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms