RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 OLFML1Q6UWY5 402 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 DDX1Q92499 740 aaKnown RBP27.32■■□□□ 1.96
VEGFA-207ENST00000413642 NOX5Q96PH1 765 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 TRIM62Q9BVG3 475 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 HSD3B7Q9H2F3 369 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 PDCL3Q9H2J4 239 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 CD93Q9NPY3 652 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 RXFP3Q9NSD7 469 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 COX16Q9P0S2 106 aa27.32■■□□□ 1.96
VEGFA-207ENST00000413642 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-207ENST00000413642 CD70P32970 193 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 TYRO3Q06418 890 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 EIF4EBP2Q13542 120 aaPredicted RBP27.31■■□□□ 1.96
VEGFA-207ENST00000413642 EFHC1Q5JVL4 640 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 PLA2G2CQ5R387 149 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 TCEAL6Q6IPX3 200 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 CHST9Q7L1S5 443 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 TMEFF1Q8IYR6 380 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 CFAP52Q8N1V2 620 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 CYB5D2Q8WUJ1 264 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 UCMAQ8WVF2 138 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 TCEAL3Q969E4 200 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 SYNCQ9H7C4 482 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 LIMA1Q9UHB6 759 aaKnown RBP27.31■■□□□ 1.96
VEGFA-207ENST00000413642 GGA2Q9UJY4 613 aa27.31■■□□□ 1.96
VEGFA-207ENST00000413642 PRR5-ARHGAP8B1AHC4 643 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 MAP3K13O43283 966 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 ZNF806P0C7X5 589 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 PRKCHP24723 683 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 DHPSP49366 369 aaPredicted RBP27.3■■□□□ 1.96
VEGFA-207ENST00000413642 POLR2FP61218 127 aaKnown RBP27.3■■□□□ 1.96
VEGFA-207ENST00000413642 ARHGAP8P85298 464 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 SLC6A3Q01959 620 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 ENPP2Q13822 863 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 FUT11Q495W5 492 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 C2CD6Q53TS8 623 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 MS4A13Q5J8X5 152 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 FKBP15Q5T1M5 1219 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 RAP1GAP2Q684P5 730 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 RNF43Q68DV7 783 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 ARMCX6Q7L4S7 300 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 ADIPOR2Q86V24 386 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 DEFB119Q8N690 84 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 TMEM35BQ8NCS4 154 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 FAM204AQ9H8W3 233 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 NLRC4Q9NPP4 1024 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 ASNSD1Q9NWL6 643 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 SIK3Q9Y2K2 1263 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 PCDHGA5Q9Y5G8 931 aa27.3■■□□□ 1.96
VEGFA-207ENST00000413642 SDK1Q7Z5N4 2213 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 BCLAF3A2AJT9 711 aaKnown RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 HSF2BPO75031 334 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 GFPT2O94808 682 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 APOEP02649 317 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 TPM2P07951 284 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 GLI1P08151 1106 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 MMEP08473 750 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 PABPC1P11940 636 aaKnown RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 ZNF18P17022 549 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 CDH5P33151 784 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 ATXN1P54253 815 aaKnown RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 CDK17Q00537 523 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 EIF4HQ15056 248 aaKnown RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 SYCP1Q15431 976 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 MPP7Q5T2T1 576 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 KIAA0907Q7Z7F0 614 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 C11orf74Q86VG3 221 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 LGI2Q8N0V4 545 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 AOPEPQ8N6M6 819 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.29■■□□□ 1.967e-8■■□□□ 11.5
VEGFA-207ENST00000413642 HJURPQ8NCD3 748 aaPredicted RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 SLC20A1Q8WUM9 679 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 SPACA7Q96KW9 195 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 MRGPRX1Q96LB2 322 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 DDX50Q9BQ39 737 aaKnown RBP27.29■■□□□ 1.96
VEGFA-207ENST00000413642 DDIT4Q9NX09 232 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 CEP83Q9Y592 693 aa27.29■■□□□ 1.96
VEGFA-207ENST00000413642 HLA-EP13747 358 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 PTGER3P43115 390 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 PUM1Q14671 1186 aaKnown RBP eCLIP27.28■■□□□ 1.961e-7■■■□□ 15.4
VEGFA-207ENST00000413642 APTXQ7Z2E3 356 aaKnown RBP27.28■■□□□ 1.96
VEGFA-207ENST00000413642 MFN1Q8IWA4 741 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 EPS8L1Q8TE68 723 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 LMLNQ96KR4 655 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 ADAM33Q9BZ11 813 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 CDV3Q9UKY7 258 aaKnown RBP27.28■■□□□ 1.96
VEGFA-207ENST00000413642 CYP8B1Q9UNU6 501 aa27.28■■□□□ 1.96
VEGFA-207ENST00000413642 ZBTB24O43167 697 aaPredicted RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 TIMM44O43615 452 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 DAB1O75553 588 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 CAVIN2O95810 425 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 ATP1A3P13637 1013 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 TACR2P21452 398 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 RNASE9P60153 205 aaKnown RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 ANO6Q4KMQ2 910 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 FSCBQ5H9T9 825 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 MBLAC2Q68D91 279 aa27.27■■□□□ 1.96
VEGFA-207ENST00000413642 CAVIN1Q6NZI2 390 aaKnown RBP27.27■■□□□ 1.96
VEGFA-207ENST00000413642 KIAA1324Q6UXG2 1013 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms