RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 FAM204AQ9H8W3 233 aa19.28■□□□□ 0.68
CIRBP-202ENST00000413636 FAM114A2Q9NRY5 505 aa19.28■□□□□ 0.68
CIRBP-202ENST00000413636 CALCOCO1Q9P1Z2 691 aa19.28■□□□□ 0.68
CIRBP-202ENST00000413636 EFR3BQ9Y2G0 817 aa19.28■□□□□ 0.68
CIRBP-202ENST00000413636 DOCK8Q8NF50 2099 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 SYNJ2BP-COX16A0A087WUM0 186 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 SOBPA7XYQ1 873 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 MAP2K7O14733 419 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 MSI1O43347 362 aaKnown RBP19.27■□□□□ 0.68
CIRBP-202ENST00000413636 TJP3O95049 919 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 KRT1P04264 644 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 CKMP06732 381 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 GBP1P32455 592 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 COILP38432 576 aaPredicted RBP19.27■□□□□ 0.68
CIRBP-202ENST00000413636 MRPS25P82663 173 aaKnown RBP19.27■□□□□ 0.68
CIRBP-202ENST00000413636 NME3Q13232 169 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 RAB6CQ53S08 254 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 DAB2IPQ5VWQ8 1189 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 CCDC137Q6PK04 289 aaKnown RBP19.27■□□□□ 0.68
CIRBP-202ENST00000413636 CMTM8Q8IZV2 173 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 RAB6CQ9H0N0 254 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 SMG9Q9H0W8 520 aaKnown RBP19.27■□□□□ 0.68
CIRBP-202ENST00000413636 VIPAS39Q9H9C1 493 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 PRDM6Q9NQX0 595 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 DDIT4Q9NX09 232 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 OGFRQ9NZT2 677 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 COX16Q9P0S2 106 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 ZMYM5Q9UJ78 669 aa19.27■□□□□ 0.68
CIRBP-202ENST00000413636 HELZP42694 1942 aaKnown RBP19.27■□□□□ 0.68
CIRBP-202ENST00000413636 TTI1O43156 1089 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 IGLV3-25P01717 112 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 AVPR1AP37288 418 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 DRG2P55039 364 aaKnown RBP19.26■□□□□ 0.67
CIRBP-202ENST00000413636 SLC25A11Q02978 314 aaKnown RBP19.26■□□□□ 0.67
CIRBP-202ENST00000413636 KLF1Q13351 362 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-202ENST00000413636 LEXMQ3ZCV2 418 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 GRK7Q8WTQ7 553 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 FAM172AQ8WUF8 416 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 IFT81Q8WYA0 676 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 SLCO2A1Q92959 643 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 SERPINB11Q96P15 392 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 MYADMQ96S97 322 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 SMPD4Q9NXE4 827 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 CDH7Q9ULB5 785 aa19.26■□□□□ 0.67
CIRBP-202ENST00000413636 NUP210Q8TEM1 1887 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-202ENST00000413636 SLC12A8A0AV02 714 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 IRAK2O43187 625 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 HMBSP08397 361 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 GBP2P32456 591 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 GJC1P36383 396 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ATXN1P54253 815 aaKnown RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 SLC7A9P82251 487 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 DEUP1Q05D60 604 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CCNG2Q16589 344 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 TFDP3Q5H9I0 405 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 SYDE1Q6ZW31 735 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 BNIPLQ7Z465 357 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CCDC105Q8IYK2 499 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ZSCAN18Q8TBC5 510 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CASKIN2Q8WXE0 1202 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CENPIQ92674 756 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CAVIN3Q969G5 261 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ERP44Q9BS26 406 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 KLF16Q9BXK1 252 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 PIGVQ9NUD9 493 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CPQQ9Y646 472 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 EYSQ5T1H1 3165 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 TCRBV7S2A1N4TA0A589 114 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 MYBL2P10244 700 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CARSP49589 748 aaKnown RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 TFF2Q03403 129 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 GPS2Q13227 327 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 CASP8Q14790 479 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 SPOCD1Q6ZMY3 1216 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 STRADAQ7RTN6 431 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ARID3BQ8IVW6 561 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ZDHHC14Q8IZN3 488 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ARFGAP1Q8N6T3 406 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 RNF25Q96BH1 459 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 PGAP3Q96FM1 320 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ZFRQ96KR1 1074 aaKnown RBP19.25■□□□□ 0.67
CIRBP-202ENST00000413636 GKN1Q9NS71 199 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 FAM53CQ9NYF3 392 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 GDE1Q9NZC3 331 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 USP18Q9UMW8 372 aa19.25■□□□□ 0.67
CIRBP-202ENST00000413636 ENDOD1O94919 500 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 PRAMEF12O95522 483 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 F9P00740 461 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 IRF1P10914 325 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 MIPP30301 263 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 RDXP35241 583 aaKnown RBP19.24■□□□□ 0.67
CIRBP-202ENST00000413636 PTGIRP43119 386 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 TNNT3P45378 269 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-202ENST00000413636 HDAC4P56524 1084 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 TBX4P57082 545 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 ZXDBP98169 803 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 LMNB2Q03252 620 aa19.24■□□□□ 0.67
CIRBP-202ENST00000413636 EIF4EBP2Q13542 120 aaPredicted RBP19.24■□□□□ 0.67
CIRBP-202ENST00000413636 TRIP4Q15650 581 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms