RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 CAPNS2Q96L46 248 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 HSFY1Q96LI6 401 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 CINPQ9BW66 212 aaPredicted RBP11.49□□□□□ -0.57
PTPRF-204ENST00000412568 MPP6Q9NZW5 540 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 ANGPTL2Q9UKU9 493 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 CCDC22O60826 627 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 DUSP11O75319 330 aaKnown RBP11.49□□□□□ -0.57
PTPRF-204ENST00000412568 SKAP2O75563 359 aaPredicted RBP11.49□□□□□ -0.57
PTPRF-204ENST00000412568 CHEK2O96017 543 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 NUDT17P0C025 328 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 SLC2A3P11169 496 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 MYL4P12829 197 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 RAD51Q06609 339 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 LRRC36Q1X8D7 754 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 ZCCHC9Q8N567 271 aaKnown RBP11.49□□□□□ -0.57
PTPRF-204ENST00000412568 SH3GL2Q99962 352 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 TRPV6Q9H1D0 765 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 LRRC40Q9H9A6 602 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 NOD2Q9HC29 1040 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 IL1RAPL1Q9NZN1 696 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 VPS28Q9UK41 221 aa11.49□□□□□ -0.57
PTPRF-204ENST00000412568 NHSL1Q5SYE7 1610 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 SPATA31D3P0C874 917 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 WNT7BP56706 349 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 MAXP61244 160 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 FASTKD3Q14CZ7 662 aaKnown RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 MARC1Q5VT66 337 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 SPATA31D4Q6ZUB0 917 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ZDHHC17Q8IUH5 632 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 UTP6Q9NYH9 597 aaKnown RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 NCF1BA6NI72 391 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 NCF1CA8MVU1 366 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 B2RBV5 119 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 NVLO15381 856 aaKnown RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 PIRTP0C851 137 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 FGFR1P11362 822 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 UNGP13051 313 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 NCF1P14598 390 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 TCN1P20061 433 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 KCNA4P22459 653 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 RAP1GAP2Q684P5 730 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ST13P4Q8IZP2 240 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 FRMD8P1Q9BZ68 369 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ANLNQ9NQW6 1124 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 MARCH2Q9P0N8 246 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 KANSL3Q9P2N6 904 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 SNX10Q9Y5X0 201 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 PLCH1Q4KWH8 1693 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 MYH8P13535 1937 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 MYH1P12882 1939 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 GOLGA8QA0A0J9YX86 632 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 GOLGA8OA6NCC3 632 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 GOLGA8NF8WBI6 632 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 AKT1P31749 480 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 PPARGP37231 505 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 HADHAP40939 763 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 MPP3Q13368 585 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 UGP2Q16851 508 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ANKRD20A2Q5SQ80 823 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ANKRD20A1Q5TYW2 823 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 CRELD2Q6UXH1 353 aaPredicted RBP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 AGGF1Q8N302 714 aaeCLIP11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ALLCQ8N6M5 410 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 EXOC2Q96KP1 924 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 FBXL18Q96ME1 805 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 PCDH18Q9HCL0 1135 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 ETNK2Q9NVF9 386 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
PTPRF-204ENST00000412568 STX7O15400 261 aaKnown RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 MYL2P10916 166 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 MRPS5P82675 430 aaKnown RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 PDCD2Q16342 344 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 LRRC38Q5VT99 294 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 LAYNQ6UX15 382 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 LGI2Q8N0V4 545 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 FGD4Q96M96 766 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 THTPAQ9BU02 230 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 YY1AP1Q9H869 796 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 MYO5AQ9Y4I1 1855 aaKnown RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 AIM2O14862 343 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 RAMP2O60895 175 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 ENO3P13929 434 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 MATKP42679 507 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 ASPAP45381 313 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 PLD1Q13393 1074 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 ZNF618Q5T7W0 954 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 ANGPTL8Q6UXH0 198 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 SLC26A7Q8TE54 656 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 MRPS31Q92665 395 aaKnown RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 B3GALT6Q96L58 329 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 RHOBTB2Q9BYZ6 727 aa11.47□□□□□ -0.57
PTPRF-204ENST00000412568 FRMD8Q9BZ67 464 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-204ENST00000412568 C12orf65Q9H3J6 166 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms