RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 NOD2Q9HC29 1040 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 SAE1Q9UBE0 346 aaPredicted RBP16.4■□□□□ 0.22
NCOA1-205ENST00000406961 SPASTQ9UBP0 616 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 CCNE2O96020 404 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 NME5P56597 212 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 EEF1DP3Q658K8 133 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 TCP10LQ8TDR4 215 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 ECSITQ9BQ95 431 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 TMEM161AQ9NX61 479 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 E9PBE3 544 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 KLHL41O60662 606 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 NPR3P17342 541 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 TFE3P19532 575 aaPredicted RBP16.4■□□□□ 0.22
NCOA1-205ENST00000406961 EFCAB1Q9HAE3 211 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 ETNK2Q9NVF9 386 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 TRUB2O95900 331 aaKnown RBP16.4■□□□□ 0.22
NCOA1-205ENST00000406961 ETS1P14921 441 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 RAG1P15918 1043 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 WEE1P30291 646 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 MARSP56192 900 aaKnown RBP16.4■□□□□ 0.22
NCOA1-205ENST00000406961 PDPK2PQ6A1A2 396 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 FGFBP2Q9BYJ0 223 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 ATXN3LQ9H3M9 355 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 SYNDIG1Q9H7V2 258 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 GIMAP4Q9NUV9 329 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 KLRC2P26717 231 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 TUFMP49411 452 aaKnown RBP16.4■□□□□ 0.22
NCOA1-205ENST00000406961 ZNF135P52742 658 aaPredicted RBP16.4■□□□□ 0.22
NCOA1-205ENST00000406961 HORMAD1Q86X24 394 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 VAT1Q99536 393 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 CTNNAL1Q9UBT7 734 aa16.4■□□□□ 0.22
NCOA1-205ENST00000406961 RAP1GDS1P52306 607 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 CYLC2Q14093 348 aaPredicted RBP16.39■□□□□ 0.21
NCOA1-205ENST00000406961 C11orf96Q7Z7L8 435 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 TSEN2Q8NCE0 465 aaKnown RBP16.39■□□□□ 0.21
NCOA1-205ENST00000406961 PRDM16Q9HAZ2 1276 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 IFT172Q9UG01 1749 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 SASH3O75995 380 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 NOMO3P69849 1222 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 SKOR1P84550 965 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 RASA2Q15283 850 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 SPDYCQ5MJ68 293 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 ARMC6Q6NXE6 501 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 CYB5D1Q6P9G0 228 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 SLC22A9Q8IVM8 553 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.21
NCOA1-205ENST00000406961 DMC1Q14565 340 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 C18orf25Q96B23 403 aaPredicted RBP16.39■□□□□ 0.21
NCOA1-205ENST00000406961 OTULINQ96BN8 352 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 CNDP1Q96KN2 507 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 THUMPD3Q9BV44 507 aaKnown RBP16.39■□□□□ 0.21
NCOA1-205ENST00000406961 ZNF556Q9HAH1 456 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 TPBGLP0DKB5 382 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 CCDC153Q494R4 210 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 IRF2BP2Q7Z5L9 587 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 NEUROG2Q9H2A3 272 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 VAPBO95292 243 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 KCNA3P22001 575 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 CALB2P22676 271 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 ATP13A4Q4VNC1 1196 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 SH3BP5LQ7L8J4 393 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 C12orf56Q8IXR9 622 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 HSFY1Q96LI6 401 aa16.39■□□□□ 0.21
NCOA1-205ENST00000406961 SRPK1Q96SB4 655 aaKnown RBP16.39■□□□□ 0.21
NCOA1-205ENST00000406961 FAM95CA0A1B0GW59 222 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 LIASO43766 372 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 GRM5P41594 1212 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 FAAP100Q0VG06 881 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 ZNF662Q6ZS27 426 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 CDH9Q9ULB4 789 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 C16orf96A6NNT2 1141 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 RNASEH1O60930 286 aaKnown RBP16.38■□□□□ 0.21
NCOA1-205ENST00000406961 ARIH2O95376 493 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 MAPK1P28482 360 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 PARP6Q2NL67 630 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 SLC45A4Q5BKX6 768 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 LPPQ93052 612 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 PLIN5Q00G26 463 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 ZNF470Q6ECI4 717 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 RGMBQ6NW40 437 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 PGM2Q96G03 612 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 IKZF4Q9H2S9 585 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 UXTQ9UBK9 157 aaPredicted RBP16.38■□□□□ 0.21
NCOA1-205ENST00000406961 CRYBB1P53674 252 aaPredicted RBP16.38■□□□□ 0.21
NCOA1-205ENST00000406961 KLC1Q07866 573 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 ZC3H12BQ5HYM0 836 aaKnown RBP16.38■□□□□ 0.21
NCOA1-205ENST00000406961 GPR20Q99678 358 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 OR12D3Q9UGF7 316 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 SPTLC1O15269 473 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 VHLP40337 213 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 PBX1P40424 430 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 SLC1A6P48664 564 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 PLOD1Q02809 727 aaPredicted RBP16.38■□□□□ 0.21
NCOA1-205ENST00000406961 B3GALNT2Q8NCR0 500 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 VPS50Q96JG6 964 aa16.38■□□□□ 0.21
NCOA1-205ENST00000406961 SELENONQ9NZV5 590 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms