RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PLEKHA5Q9HAU0 1116 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 BCCIPQ9P287 314 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 AASSQ9UDR5 926 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 SERGEFQ9UGK8 458 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 RIMKLBQ9ULI2 386 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ST3GAL5Q9UNP4 418 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 SH2B3Q9UQQ2 575 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 RRP7AQ9Y3A4 280 aaKnown RBP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 AFG3L2Q9Y4W6 797 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ANKRD18BA2A2Z9 1011 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 VWA3AA6NCI4 1184 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC16A3O15427 465 aaKnown RBP5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF500O60304 480 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 TSPAN3O60637 253 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 USO1O60763 962 aaKnown RBP5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 KRT38O76015 456 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 TJP3O95049 919 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 LARGE1O95461 756 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 ADORA2AP29274 412 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 EPHA3P29320 983 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 PRKAR1BP31321 381 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 PDE6CP51160 858 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 CLCN2P51788 898 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 RPS6KA2Q15349 733 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 CTXN3Q4LDR2 81 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 TSTD2Q5T7W7 516 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 TEDDM1Q5T9Z0 273 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 PIK3AP1Q6ZUJ8 805 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 SYT13Q7L8C5 426 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF551Q7Z340 670 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 TTC30AQ86WT1 665 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 ABRAQ8N0Z2 381 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 ADAMTS15Q8TE58 950 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZUFSPQ96AP4 578 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 KTI12Q96EK9 354 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 IRAK4Q9NWZ3 460 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 DLL3Q9NYJ7 618 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 TBX20Q9UMR3 447 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 USP22Q9UPT9 525 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC27A6Q9Y2P4 619 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 SNX14Q9Y5W7 946 aa5.51□□□□□ -1.53
HMGB1P13-201ENST00000406019 LOC105369274A0A096LPK9 316 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 LOC102723532A0A0G2JNH3 316 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 A0A1W2PPH5 198 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 SAC3D1A6NKF1 404 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 CGB1A6NKQ9 187 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 KIF28PB7ZC32 967 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 H0YIZ8 118 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 GFPT2O94808 682 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 NXPH3O95157 252 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 TIRAPP58753 221 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 TFF2Q03403 129 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 SF3A3Q12874 501 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 MTAPQ13126 283 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 BAK1Q16611 211 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 TTLL5Q6EMB2 1281 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ANO7Q6IWH7 933 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF788Q6ZQV5 615 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 AMIGO2Q86SJ2 522 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 RASAL3Q86YV0 1011 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 OR4N4Q8N0Y3 316 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ANKRD52Q8NB46 1076 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 NGDNQ8NEJ9 315 aaKnown RBP5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZMIZ2Q8NF64 920 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 TDRD7Q8NHU6 1098 aaKnown RBP5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 UCMAQ8WVF2 138 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 HMGB4Q8WW32 186 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 DPF1Q92782 380 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 MCRS1Q96EZ8 462 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 RSRC1Q96IZ7 334 aaKnown RBP5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 BARD1Q99728 777 aaKnown RBP5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 MECRQ9BV79 373 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 VN1R3Q9BXE9 311 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 CPNE5Q9HCH3 593 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 RXFP3Q9NSD7 469 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ASAP1Q9ULH1 1129 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 GABRQQ9UN88 632 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ARHGAP26Q9UNA1 814 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZBTB1Q9Y2K1 713 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 FRMD4BQ9Y2L6 1034 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 CYP46A1Q9Y6A2 500 aa5.5□□□□□ -1.53
HMGB1P13-201ENST00000406019 PGPEP1LA6NFU8 196 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC38A8A6NNN8 435 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 STX16-NPEPL1H3BU86 382 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 MASP2O00187 686 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 STX16O14662 325 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 CTIFO43310 598 aaKnown RBP5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 FIBPO43427 364 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 ORC4O43929 436 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 RTN3O95197 1032 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 TTLL1O95922 423 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 C1RP00736 705 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 CSF1P09603 554 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF37AP17032 561 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 GPD1P21695 349 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 CCT8P50990 548 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 CCT4P50991 539 aaKnown RBP5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 RBM5P52756 815 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 FOXF2Q12947 444 aa5.49□□□□□ -1.53
HMGB1P13-201ENST00000406019 DCTN1Q14203 1278 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms