RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 KCTD14Q9BQ13 255 aaPredicted RBP8.57□□□□□ -1.04
CHD8-201ENST00000399982 TBCDQ9BTW9 1192 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 PCDH9Q9HC56 1237 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 SDR42E2A6NKP2 422 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 KIF28PB7ZC32 967 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 UBDO15205 165 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 SSNA1O43805 119 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 ZNF682O95780 498 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 GRK3P35626 688 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 CPA2P48052 419 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 CHRNDQ07001 517 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 DEPDC4Q8N2C3 294 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 CCDC54Q8NEL0 328 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 HAVCR1Q96D42 359 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 PLEKHG4BQ96PX9 1271 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 PAFAH2Q99487 392 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 ADAM33Q9BZ11 813 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 NMRK2Q9NPI5 230 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 CDH9Q9ULB4 789 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 A0A0X1KG70 313 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 M0QX08 132 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 HAT1O14929 419 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 ACAP2Q15057 778 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 KLHDC7AQ5VTJ3 777 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 ATPAF2Q8N5M1 289 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 MYLPFQ96A32 169 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 AGPAT5Q9NUQ2 364 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 ABCA8O94911 1581 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 ZNF879B4DU55 563 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 MYL12AP19105 171 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
CHD8-201ENST00000399982 IST1P53990 364 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 TNK2Q07912 1038 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 XKRXQ6PP77 449 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 B3GALNT2Q8NCR0 500 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 SLC30A5Q8TAD4 765 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 RASGRP4Q8TDF6 673 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 CNKSR1Q969H4 720 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
CHD8-201ENST00000399982 EHD3Q9NZN3 535 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 PNMA3Q9UL41 463 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 AFF2P51816 1311 aa8.57□□□□□ -1.04
CHD8-201ENST00000399982 FAM220BPB1ANY3 271 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ATP6V1G1O75348 118 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 DLG1Q12959 904 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ATP13A5Q4VNC0 1218 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 SYCE2Q6PIF2 218 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 UTP15Q8TED0 518 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 USP13Q92995 863 aaPredicted RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 TPD52L3Q96J77 140 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 PNPLA7Q6ZV29 1317 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 OVOS2A0A0G2JMS6 1433 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ASB14A6NK59 587 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 TPST1O60507 370 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ADRA2BP18089 450 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ATP6V1B2P21281 511 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 QARSP47897 775 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 CCR4P51679 360 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 CDKAL1Q5VV42 579 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 HLA-DQA1Q5Y7H0 255 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 RBM44Q6ZP01 1051 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 FBXW8Q8N3Y1 598 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 DQX1Q8TE96 717 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 PIGKQ92643 395 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ZNF560Q96MR9 790 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 GRXCR2A6NFK2 248 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 C2CD2LO14523 706 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 KCNQ3O43525 872 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 DHFRP00374 187 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 ANPEPP15144 967 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 NCK1P16333 377 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 PAICSP22234 425 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 HOXD10P28358 340 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 PHKA2P46019 1235 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 CDC42EP1Q00587 391 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 IL5RAQ01344 420 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 SRSF11Q05519 484 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 FRG1Q14331 258 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 RELL1Q8IUW5 271 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 POC5Q8NA72 575 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 NCF1BA6NI72 391 aaPredicted RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 NCF1CA8MVU1 366 aaPredicted RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 PLK4O00444 970 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 SASH3O75995 380 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 CCNE2O96020 404 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 NCF1P14598 390 aaPredicted RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 VCLP18206 1134 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 IFNGR2P38484 337 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 GSSP48637 474 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 MMP14P50281 582 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 PEX5LQ8IYB4 626 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 SNIP1Q8TAD8 396 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 PABPC5Q96DU9 382 aaKnown RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 SEPT5Q99719 369 aaPredicted RBP8.56□□□□□ -1.04
CHD8-201ENST00000399982 ARHGEF40Q8TER5 1519 aa8.56□□□□□ -1.04
CHD8-201ENST00000399982 PDLIM1O00151 329 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms