RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 IRF5Q13568 498 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 UBXN11Q5T124 520 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 C4orf50Q6ZRC1 276 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 CCDC33Q8N5R6 958 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 NPY6RQ99463 290 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 LGMNQ99538 433 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 MMADHCQ9H3L0 296 aaPredicted RBP23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 PPP1R12AO14974 1030 aaPredicted RBP23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 ADCY6O43306 1168 aa23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 GM2AP17900 193 aa23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 DCAF6Q58WW2 860 aa23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 BRI3BPQ8WY22 251 aa23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 TRIM56Q9BRZ2 755 aaKnown RBP23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 DCLRE1BQ9H816 532 aa23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 RNF19AQ9NV58 838 aa23.78■■□□□ 1.4
RABGGTA-202ENST00000399409 MFSD10Q14728 455 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 PAFAH1B3Q15102 231 aaKnown RBP23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 CASC4Q6P4E1 433 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 OSTM1Q86WC4 334 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 DNAJB3Q8WWF6 145 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 P2RY11Q96G91 374 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 SIKE1Q9BRV8 207 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 NPR3P17342 541 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 LILRA4P59901 499 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 AP1B1Q10567 949 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 STX3Q13277 289 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 OTUD1Q5VV17 481 aaPredicted RBP23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 ARHGAP24Q8N264 748 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 PDCD7Q8N8D1 485 aaKnown RBP23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 NPLOC4Q8TAT6 608 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 ZNF570Q96NI8 536 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 SLC2A13Q96QE2 648 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 LRRC4Q9HBW1 653 aa23.77■■□□□ 1.4
RABGGTA-202ENST00000399409 AIF1P55008 147 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 ADAM17P78536 824 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 SOX4Q06945 474 aaPredicted RBP23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 TBCCQ15814 346 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 ARID3BQ8IVW6 561 aaPredicted RBP23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 SMC1BQ8NDV3 1235 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 MCUR1Q96AQ8 359 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 RNF39Q9H2S5 420 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 THAP1Q9NVV9 213 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 IGSF9Q9P2J2 1179 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 RAD54BQ9Y620 910 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 GLRA3O75311 464 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 PTPN1P18031 435 aaKnown RBP23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 LRPAP1P30533 357 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 WASHC5Q12768 1159 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 FAM110CQ1W6H9 321 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 PACS1Q6VY07 963 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 PAXIP1Q6ZW49 1069 aaPredicted RBP23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 PDZD4Q76G19 769 aaPredicted RBP23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 ATP2A3Q93084 1043 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 WNT8BQ93098 351 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 PRR11Q96HE9 360 aaPredicted RBP23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 SLC9A7Q96T83 725 aa23.76■■□□□ 1.39
RABGGTA-202ENST00000399409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 CYB561D2O14569 222 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 RARBP10826 455 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 CRYMQ14894 314 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 RINLQ6ZS11 566 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 SIX6OS1Q8N1H7 587 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 TMEM40Q8WWA1 233 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 PARK7Q99497 189 aaKnown RBP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 NMUR2Q9GZQ4 415 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 XPNPEP3Q9NQH7 507 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 DCDC2Q9UHG0 476 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 GNEQ9Y223 722 aaKnown RBP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 LRRC42Q9Y546 428 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 CCDC195A0A1B0GUA6 201 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 M0QYT0 321 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 MGAT1P26572 445 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 PSEN2P49810 448 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 CRYBB1P53674 252 aaPredicted RBP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 DEUP1Q05D60 604 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 IFRD2Q12894 506 aaPredicted RBP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 DPYSQ14117 519 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 TTC8Q8TAM2 541 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 GOLGA2P5Q9HBQ8 144 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 TAS2R1Q9NYW7 299 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 HBS1LQ9Y450 684 aaKnown RBP23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 IPPQ9Y573 584 aa23.75■■□□□ 1.39
RABGGTA-202ENST00000399409 C2orf71A6NGG8 1288 aa23.74■■□□□ 1.39
RABGGTA-202ENST00000399409 EEF2KO00418 725 aaKnown RBP23.74■■□□□ 1.39
RABGGTA-202ENST00000399409 FBXO21O94952 628 aa23.74■■□□□ 1.39
RABGGTA-202ENST00000399409 SESN2P58004 480 aaPredicted RBP23.74■■□□□ 1.39
RABGGTA-202ENST00000399409 ALYREFQ86V81 257 aaKnown RBP23.74■■□□□ 1.39
RABGGTA-202ENST00000399409 ARNTL2Q8WYA1 636 aa23.74■■□□□ 1.39
RABGGTA-202ENST00000399409 CAPN14A8MX76 684 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 ENTPD5O75356 428 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 LUC7L3O95232 432 aaKnown RBP23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 TAF11Q15544 211 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 INSCQ1MX18 579 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 CMPK2Q5EBM0 449 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 CES4AQ5XG92 561 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 RFX8Q6ZV50 586 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 TTC7BQ86TV6 843 aa23.73■■□□□ 1.39
RABGGTA-202ENST00000399409 NME8Q8N427 588 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms