RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RETREG1Q9H6L5 497 aa18.32■□□□□ 0.52
CTNS-203ENST00000399306 CALCOCO1Q9P1Z2 691 aa18.32■□□□□ 0.52
CTNS-203ENST00000399306 KIAA1549LQ6ZVL6 1849 aa18.32■□□□□ 0.52
CTNS-203ENST00000399306 TYW5A2RUC4 315 aaKnown RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 EIF3CLB5ME19 914 aaKnown RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 TFE3P19532 575 aaPredicted RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 OPRD1P41143 372 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 RPS9P46781 194 aaKnown RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 NUBP1P53384 320 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 HDAC4P56524 1084 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 NRG1Q02297 640 aaPredicted RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 TCEAL1Q15170 157 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 C5orf22Q49AR2 442 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 FBXO43Q4G163 708 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 TMEM31Q5JXX7 168 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 FYB2Q5VWT5 728 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 NUDT18Q6ZVK8 323 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 FAM172AQ8WUF8 416 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 PBXIP1Q96AQ6 731 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 CLDN23Q96B33 292 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 TMA16Q96EY4 203 aaKnown RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 EIF3CQ99613 913 aaKnown RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 PRMT1Q99873 361 aaKnown RBP18.31■□□□□ 0.52
CTNS-203ENST00000399306 P2RY13Q9BPV8 354 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 TKTL2Q9H0I9 626 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
CTNS-203ENST00000399306 FAM170AA1A519 330 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 SCAMP3O14828 347 aaKnown RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 GJB6O95452 261 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 TYRP14679 529 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 SOX9P48436 509 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 ATP11AP98196 1134 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 SCAPQ12770 1279 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 GRSF1Q12849 480 aaKnown RBP eCLIP18.3■□□□□ 0.52
CTNS-203ENST00000399306 LRRC32Q14392 662 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 C15orf59Q2T9L4 293 aaPredicted RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 ANO4Q32M45 955 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 MS4A13Q5J8X5 152 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 CWF19L1Q69YN2 538 aaKnown RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 ASTLQ6HA08 431 aaPredicted RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 NADSYN1Q6IA69 706 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 TXNDC11Q6PKC3 985 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 RHOT2Q8IXI1 618 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 NIPA2Q8N8Q9 360 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 HJURPQ8NCD3 748 aaPredicted RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 BAG1Q99933 345 aaPredicted RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 SLC27A6Q9Y2P4 619 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 SIT1Q9Y3P8 196 aa18.3■□□□□ 0.52
CTNS-203ENST00000399306 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
CTNS-203ENST00000399306 SYNJ2BP-COX16A0A087WUM0 186 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 FAM170BA6NMN3 283 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 NEDD8-MDP1E9PL57 170 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 F5H5T6 163 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 CCP110O43303 1012 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 ATMINO43313 823 aaPredicted RBP18.29■□□□□ 0.52
CTNS-203ENST00000399306 PAGE1O75459 146 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 RNF8O76064 485 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 MTA2O94776 668 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 IPO7O95373 1038 aaKnown RBP18.29■□□□□ 0.52
CTNS-203ENST00000399306 MOCS2O96007 188 aaPredicted RBP18.29■□□□□ 0.52
CTNS-203ENST00000399306 TACR2P21452 398 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 TARSP26639 723 aaKnown RBP18.29■□□□□ 0.52
CTNS-203ENST00000399306 ADRA1BP35368 520 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 PCK1P35558 622 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 GALK1P51570 392 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 CCINQ13939 588 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 PIGHQ14442 188 aaPredicted RBP18.29■□□□□ 0.52
CTNS-203ENST00000399306 E2F5Q15329 346 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 RABGAP1LQ5R372 815 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 TPGS1Q6ZTW0 290 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 DNAAF5Q86Y56 855 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 PSTKQ8IV42 348 aaKnown RBP18.29■□□□□ 0.52
CTNS-203ENST00000399306 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 TTC8Q8TAM2 541 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 KCNV2Q8TDN2 545 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 DDI1Q8WTU0 396 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 PNKPQ96T60 521 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 NUP85Q9BW27 656 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 OSBPL2Q9H1P3 480 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 SPTLC3Q9NUV7 552 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 COX16Q9P0S2 106 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 DEC1Q9P2X7 70 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 MYO1AQ9UBC5 1043 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 IP6K2Q9UHH9 426 aa18.29■□□□□ 0.52
CTNS-203ENST00000399306 TULP3O75386 442 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 NDUFA10O95299 355 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 CHRNB1P11230 501 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 PSMA2P25787 234 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 HOXD9P28356 352 aaPredicted RBP18.28■□□□□ 0.52
CTNS-203ENST00000399306 SLC6A4P31645 630 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 GRIA2P42262 883 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 OGDHQ02218 1023 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 UBXN2BQ14CS0 331 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 PON2Q15165 354 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 SPA17Q15506 151 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 CDO1Q16878 200 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 MAMSTRQ6ZN01 415 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 CHSY1Q86X52 802 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 FAM131BQ86XD5 332 aa18.28■□□□□ 0.52
CTNS-203ENST00000399306 TMEM139Q8IV31 216 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms