RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 RTP4Q96DX8 246 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 MCRS1Q96EZ8 462 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 NLRP4Q96MN2 994 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 ZNF358Q9NW07 568 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 OATP04181 439 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 ABCE1P61221 599 aaKnown RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 MYBPC1Q00872 1141 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 CA9Q16790 459 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 KLHL23Q8NBE8 558 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 PCDH19Q8TAB3 1148 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 LRGUKQ96M69 825 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 Q9H521 79 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 TMEM216Q9P0N5 145 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 PSAT1Q9Y617 370 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 KIAA1217Q5T5P2 1943 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 FBXO21O94952 628 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 PRKCGP05129 697 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 RALBP11234 206 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 PCSK6P29122 969 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 SERPINB5P36952 375 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 MAGEA3P43357 314 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 CXCL9Q07325 125 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 KLF10Q13118 480 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 SLC9B1Q4ZJI4 515 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 PPP6R3Q5H9R7 873 aaPredicted RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 C6orf52Q5T4I8 152 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 PGBD4Q96DM1 585 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 CLMNQ96JQ2 1002 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 PPP1R36Q96LQ0 422 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 COPS7BQ9H9Q2 264 aaPredicted RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 ZNF302Q9NR11 478 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 NUDT2P50583 147 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 OR6B2Q6IFH4 312 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 PACS1Q6VY07 963 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 GALNT4Q8N4A0 578 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 MCUQ8NE86 351 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 CEP70Q8NHQ1 597 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 ATP2A3Q93084 1043 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 ABTB1Q969K4 478 aaPredicted RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 ATG4CQ96DT6 458 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 CNPY3Q9BT09 278 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 MRPS26Q9BYN8 205 aaKnown RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 RBM38Q9H0Z9 239 aaKnown RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 COG4Q9H9E3 785 aa14.38□□□□□ -0.11
APOB-202ENST00000399256 NGRNQ9NPE2 291 aaKnown RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 C6orf203Q9P0P8 240 aaPredicted RBP14.38□□□□□ -0.11
APOB-202ENST00000399256 A0A0J9YVX5 310 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 BCLAF3A2AJT9 711 aaKnown RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 TRPA1O75762 1119 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 MAGEA6P43360 314 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 SP2Q02086 613 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 LENG8Q96PV6 779 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 MRPL1Q9BYD6 325 aaKnown RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 MOCS1Q9NZB8 636 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 AK5Q9Y6K8 562 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 GOLGA8QA0A0J9YX86 632 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 GOLGA8OA6NCC3 632 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 SPDYE16A6NNV3 312 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 GOLGA8NF8WBI6 632 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 MAFGO15525 162 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 F7P08709 466 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 HOXC6P09630 235 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 CDK4P11802 303 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 HDAC4P56524 1084 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 ACAP1Q15027 740 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 PPM1LQ5SGD2 360 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 RARS2Q5T160 578 aaKnown RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 BSPRYQ5W0U4 402 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 MAP7D3Q8IWC1 876 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 RNF148Q8N7C7 305 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 ZNF781Q8N8C0 355 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 ZNF668Q96K58 619 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 ELOVL4Q9GZR5 314 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 RPAP3Q9H6T3 665 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 PCDH18Q9HCL0 1135 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 COPG2Q9UBF2 871 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 TNFAIP8O95379 198 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 TNNC2P02585 160 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 MYL4P12829 197 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 TGM2P21980 687 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 GALK1P51570 392 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 PTPN11Q06124 597 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 CBLBQ13191 982 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 TMED1Q13445 227 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 DBN1Q16643 649 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 MAPK15Q8TD08 544 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 RTKNQ9BST9 563 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 SENP6Q9GZR1 1112 aaPredicted RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 TMEM134Q9H6X4 195 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 DMTF1Q9Y222 760 aa14.37□□□□□ -0.11
APOB-202ENST00000399256 GNEQ9Y223 722 aaKnown RBP14.37□□□□□ -0.11
APOB-202ENST00000399256 SSX2IPQ9Y2D8 614 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms