RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 CYTH4Q9UIA0 394 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 TRPV2Q9Y5S1 764 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF541Q9H0D2 1346 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 GRIN2DO15399 1336 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 LRRC14BA6NHZ5 514 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 BTBD19C9JJ37 291 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 TP73O15350 636 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 HOXA11P31270 313 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CPT1AP50416 773 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 EVX2Q03828 476 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SCRN3Q0VDG4 424 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 COASYQ13057 564 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 DRP2Q13474 957 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SGCAQ16586 387 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ASPRV1Q53RT3 343 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 AARS2Q5JTZ9 985 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 USP17L2Q6R6M4 530 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 C15orf52Q6ZUT6 534 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 YTHDF3Q7Z739 585 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SYCE1Q8N0S2 351 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 URGCPQ8TCY9 931 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 MS4A14Q96JA4 679 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ZDHHC15Q96MV8 337 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 OSBPL1AQ9BXW6 950 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 WDR12Q9GZL7 423 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 C2orf40Q9H1Z8 148 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 C1orf112Q9NSG2 853 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 PCDHGA3Q9Y5H0 932 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CACNG2Q9Y698 323 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 H3BUI4 141 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CCDC188H7C350 402 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FZD9O00144 591 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 TRAPPC3O43617 180 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 BUB1BO60566 1050 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ASMTLO95671 621 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PYGMP11217 842 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 MDH1P40925 334 aaKnown RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ARHGAP4P98171 946 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CDC20Q12834 499 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 AANATQ16613 207 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ASTE1Q2TB18 679 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM209BQ5JX69 171 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PAPD4Q6PIY7 484 aaKnown RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CYP4V2Q6ZWL3 525 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 SH2D3CQ8N5H7 860 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 EFHBQ8N7U6 833 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM71DQ8N9W8 422 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 HCAR2Q8TDS4 363 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 GATA6Q92908 595 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FGD4Q96M96 766 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 NT5C1BQ96P26 610 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CDRT15Q96T59 188 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 AGPAT3Q9NRZ7 376 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CREBZFQ9NS37 354 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PLAAQ9Y263 795 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 SSC5DA1L4H1 1573 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 MYH1P12882 1939 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 POTEMA6NI47 508 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 TMEM114B3SHH9 223 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PGRMC1O00264 195 aaKnown RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 SSX5O60225 188 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 EOMESO95936 686 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 RB1P06400 928 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 UBTFL6P0CB48 400 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ANPEPP15144 967 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PTPN9P43378 593 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CPA2P48052 419 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CDK8P49336 464 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 HSD17B4P51659 736 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 KRT76Q01546 638 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PTGISQ16647 500 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 HERC4Q5GLZ8 1057 aaPredicted RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 C1orf185Q5T7R7 199 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 MEI1Q5TIA1 1274 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 NAA35Q5VZE5 725 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 CATSPERGQ6ZRH7 1159 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ADCK1Q86TW2 530 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ARL14Q8N4G2 192 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC44A5Q8NCS7 719 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 GANCQ8TET4 914 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 LRRC15Q8TF66 581 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 WACQ9BTA9 647 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ISCUQ9H1K1 167 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 AGAP1Q9UPQ3 857 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 B8ZZF3 427 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 KLF4O43474 513 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM107AO95990 144 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 RAG1P15918 1043 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 KLRC1P26715 233 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 KLRK1P26718 216 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 HSPA9P38646 679 aaKnown RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 RNASE9P60153 205 aaKnown RBP6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 ADAM9Q13443 819 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 PPP2R5EQ16537 467 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 DPYSL2Q16555 572 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 AAK1Q2M2I8 961 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 EFHC1Q5JVL4 640 aa6.78□□□□□ -1.32
TM9SF4-202ENST00000398022 OLFML2BQ68BL8 750 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms