RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 PGBD3Q8N328 593 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 WDTC1Q8N5D0 677 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.48□□□□□ -0.09
SEC13-204ENST00000397099 ATP6V0D2Q8N8Y2 350 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 ZNF397Q8NF99 534 aaPredicted RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 HMGB4Q8WW32 186 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 CPXM1Q96SM3 734 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 BPIFA3Q9BQP9 254 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 LSM14BQ9BX40 385 aaKnown RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 DUSP15Q9H1R2 295 aaPredicted RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 VPS16Q9H269 839 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 FBRSQ9HAH7 460 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 ACP6Q9NPH0 428 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 VPS45Q9NRW7 570 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 FANCLQ9NW38 375 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 TAB2Q9NYJ8 693 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 LIMA1Q9UHB6 759 aaKnown RBP14.48□□□□□ -0.09
SEC13-204ENST00000397099 PLA2G4CQ9UP65 541 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
SEC13-204ENST00000397099 THADAQ6YHU6 1953 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 A0A1W2PQF6 199 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 ANTXRLA6NF34 631 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 SMTNL1A8MU46 457 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 F8VZ95 297 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 SLC30A4O14863 429 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 TRIM24O15164 1050 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 MAP3K13O43283 966 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 SYNCRIPO60506 623 aaKnown RBP14.47□□□□□ -0.09
SEC13-204ENST00000397099 TRUB2O95900 331 aaKnown RBP14.47□□□□□ -0.09
SEC13-204ENST00000397099 ABCB4P21439 1286 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 NOS2P35228 1153 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 MPLP40238 635 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 OXCT1P55809 520 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 SLC6A3Q01959 620 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 APBA1Q02410 837 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 CREB5Q02930 508 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 GEN1Q17RS7 908 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 DCAF6Q58WW2 860 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 PMS2CLQ68D20 193 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 IL31Q6EBC2 164 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 LPCAT2Q7L5N7 544 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 KIAA0907Q7Z7F0 614 aaPredicted RBP14.47□□□□□ -0.09
SEC13-204ENST00000397099 METTL3Q86U44 580 aaKnown RBP14.47□□□□□ -0.09
SEC13-204ENST00000397099 C18orf8Q96DM3 657 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 FCRL2Q96LA5 508 aaPredicted RBP14.47□□□□□ -0.09
SEC13-204ENST00000397099 SLC2A13Q96QE2 648 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 SPAG5Q96R06 1193 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 PPP1R9BQ96SB3 815 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 SMOC1Q9H4F8 434 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 ZDHHC4Q9NPG8 344 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 TJP2Q9UDY2 1190 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 STON1Q9Y6Q2 735 aa14.47□□□□□ -0.09
SEC13-204ENST00000397099 NUP205Q92621 2012 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 LGALS16A8MUM7 142 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 AP5Z1O43299 807 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 F9P00740 461 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 CCDC172P0C7W6 258 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 ZNF18P17022 549 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 HOXD12P35452 270 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 GABRB2P47870 512 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 COPB1P53618 953 aaKnown RBP14.46□□□□□ -0.09
SEC13-204ENST00000397099 TYRO3Q06418 890 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 EIF4EBP2Q13542 120 aaPredicted RBP14.46□□□□□ -0.09
SEC13-204ENST00000397099 FAM133BQ5BKY9 247 aaKnown RBP14.46□□□□□ -0.09
SEC13-204ENST00000397099 PLA2G2CQ5R387 149 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 SYPL2Q5VXT5 272 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 OR6B2Q6IFH4 312 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 OLFML1Q6UWY5 402 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 TRIM72Q6ZMU5 477 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 ARCQ7LC44 396 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 RABEPKQ7Z6M1 372 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 TAC4Q86UU9 113 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 ERICH1Q86X53 443 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 PASD1Q8IV76 773 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 FIBINQ8TAL6 211 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 DDX1Q92499 740 aaKnown RBP14.46□□□□□ -0.09
SEC13-204ENST00000397099 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 FAM204AQ9H8W3 233 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 GGA2Q9UJY4 613 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 AJAP1Q9UKB5 411 aaPredicted RBP14.46□□□□□ -0.09
SEC13-204ENST00000397099 HCN2Q9UL51 889 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 STAP1Q9ULZ2 295 aa14.46□□□□□ -0.09
SEC13-204ENST00000397099 CKAP5Q14008 2032 aa14.46□□□□□ -0.1
SEC13-204ENST00000397099 SDK1Q7Z5N4 2213 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 BCLAF3A2AJT9 711 aaKnown RBP14.45□□□□□ -0.1
SEC13-204ENST00000397099 KCNU1A8MYU2 1149 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 TSPAN3O60637 253 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 TBL1XO60907 577 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 DAB1O75553 588 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 MOCS3O95396 460 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 ASLP04424 464 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 DLDP09622 509 aaKnown RBP14.45□□□□□ -0.1
SEC13-204ENST00000397099 PABPC1P11940 636 aaKnown RBP14.45□□□□□ -0.1
SEC13-204ENST00000397099 GABRG2P18507 467 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 POLR2EP19388 210 aaKnown RBP14.45□□□□□ -0.1
SEC13-204ENST00000397099 STAT1P42224 750 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 MATKP42679 507 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 LIMK1P53667 647 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 SLC12A1Q13621 1099 aa14.45□□□□□ -0.1
SEC13-204ENST00000397099 MAP7D1Q3KQU3 841 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms