RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 DONSONQ9NYP3 566 aa14.07□□□□□ -0.16
MCF2L-209ENST00000397036 PPARGC1AQ9UBK2 798 aaKnown RBP14.07□□□□□ -0.16
MCF2L-209ENST00000397036 DMGDHQ9UI17 866 aaKnown RBP14.07□□□□□ -0.16
MCF2L-209ENST00000397036 RASAL2Q9UJF2 1139 aa14.07□□□□□ -0.16
MCF2L-209ENST00000397036 CLUHO75153 1309 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 WASH4PA8MWX3 477 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 EEF2KO00418 725 aaKnown RBP14.06□□□□□ -0.16
MCF2L-209ENST00000397036 DCLK1O15075 740 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 XYLBO75191 536 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 LRIG2O94898 1065 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 LATS1O95835 1130 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 DDX6P26196 483 aaKnown RBP eCLIP14.06□□□□□ -0.16
MCF2L-209ENST00000397036 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
MCF2L-209ENST00000397036 KCNC3Q14003 757 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 GAREM2Q75VX8 874 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 IFT20Q8IY31 132 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 CCHCR1Q8TD31 782 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 ARNTL2Q8WYA1 636 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
MCF2L-209ENST00000397036 TIFAQ96CG3 184 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 ERP44Q9BS26 406 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 KLF16Q9BXK1 252 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-209ENST00000397036 RAB17Q9H0T7 212 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 GDF3Q9NR23 364 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 ASAH2Q9NR71 780 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 TMPRSS4Q9NRS4 437 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 DNPEPQ9ULA0 475 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 NEU2Q9Y3R4 380 aa14.06□□□□□ -0.16
MCF2L-209ENST00000397036 IGLV3-10A0A075B6K4 115 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 FAM72CH0Y354 149 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 FGF10O15520 208 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ECEL1O95672 775 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 GAS8O95995 478 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 EPCAMP16422 314 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 AMPD1P23109 780 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 GABRR2P28476 465 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 TPI1P60174 286 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 SLC7A9P82251 487 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 BRD3Q15059 726 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 C5orf22Q49AR2 442 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 FAM72AQ5TYM5 149 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 NCBP2-AS2Q69YL0 99 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 FAM72DQ6L9T8 149 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 FAM72BQ86X60 149 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 MIB1Q86YT6 1006 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 JAMLQ86YT9 394 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ZNF683Q8IZ20 524 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 LZTR1Q8N653 840 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ATG4AQ8WYN0 398 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 PPP2R3CQ969Q6 453 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 MRPL38Q96DV4 380 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 GCNAQ96QF7 691 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 PRKD2Q9BZL6 878 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 FAM129AQ9BZQ8 928 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 BRD8Q9H0E9 1235 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 RNF38Q9H0F5 515 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 TLE6Q9H808 572 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 UTP11Q9Y3A2 253 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HCFC2Q9Y5Z7 792 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HS3ST4Q9Y661 456 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 PDE4DIPQ5VU43 2346 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 MTCL1Q9Y4B5 1905 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 CCDC151A5D8V7 595 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 CFAP69A5D8W1 941 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 DRGXA6NNA5 263 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HACD1B0YJ81 288 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 MCF2LO15068 1137 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 NCAM2O15394 837 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 TTI1O43156 1089 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 DAPK3O43293 454 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 CREB3O43889 395 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HEXIM1O94992 359 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ERCC2P18074 760 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 KCNJ1P48048 391 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HARS2P49590 506 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 DYNLT1P63172 113 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 DUPD1Q68J44 220 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 TMEM184AQ6ZMB5 413 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 CCNI2Q6ZMN8 369 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ALLCQ8N6M5 410 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HNRNPLLQ8WVV9 542 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ANKRD7Q92527 254 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 HAUS1Q96CS2 278 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 TBC1D31Q96DN5 1066 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 PNKPQ96T60 521 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 PRMT1Q99873 361 aaKnown RBP14.05□□□□□ -0.16
MCF2L-209ENST00000397036 NACA2Q9H009 215 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 CATSPERBQ9H7T0 1116 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 LMCD1Q9NZU5 365 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 STOML2Q9UJZ1 356 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 ZNF148Q9UQR1 794 aa14.05□□□□□ -0.16
MCF2L-209ENST00000397036 A0A1W2PPC1 479 aa14.04□□□□□ -0.16
MCF2L-209ENST00000397036 C2orf78A6NCI8 922 aa14.04□□□□□ -0.16
MCF2L-209ENST00000397036 ZNF197O14709 1029 aa14.04□□□□□ -0.16
MCF2L-209ENST00000397036 RBP3P10745 1247 aa14.04□□□□□ -0.16
MCF2L-209ENST00000397036 H2AFXP16104 143 aaPredicted RBP14.04□□□□□ -0.16
MCF2L-209ENST00000397036 PECAM1P16284 738 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms