RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 HOXD9P28356 352 aaPredicted RBP20.65■□□□□ 0.9
SNCA-203ENST00000394986 RDXP35241 583 aaKnown RBP20.65■□□□□ 0.9
SNCA-203ENST00000394986 CXCR3P49682 368 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 MAMLD1Q13495 774 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 LRRC32Q14392 662 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 PPP2R5DQ14738 602 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 PIK3R6Q5UE93 754 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 PLEKHA7Q6IQ23 1121 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 FAM131BQ86XD5 332 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 ATP6V0D2Q8N8Y2 350 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 XPO6Q96QU8 1125 aaKnown RBP20.65■□□□□ 0.9
SNCA-203ENST00000394986 DEC1Q9P2X7 70 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 NENFQ9UMX5 172 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 KMT2EQ8IZD2 1858 aa20.65■□□□□ 0.9
SNCA-203ENST00000394986 KAT7O95251 611 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 SLC2A3P11169 496 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 TACR2P21452 398 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 DRD1P21728 446 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 EIF2DP41214 584 aaKnown RBP20.64■□□□□ 0.89
SNCA-203ENST00000394986 RPS9P46781 194 aaKnown RBP20.64■□□□□ 0.89
SNCA-203ENST00000394986 SEC13P55735 322 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 OGDHQ02218 1023 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 ASTE1Q2TB18 679 aaPredicted RBP20.64■□□□□ 0.89
SNCA-203ENST00000394986 MPPE1Q53F39 396 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 MS4A13Q5J8X5 152 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 DGKKQ5KSL6 1271 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 CCDC122Q5T0U0 273 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 PKN3Q6P5Z2 889 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 ALKBH5Q6P6C2 394 aaKnown RBP20.64■□□□□ 0.89
SNCA-203ENST00000394986 DCUN1D2Q6PH85 259 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 DTWD2Q8NBA8 298 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 TMA16Q96EY4 203 aaKnown RBP20.64■□□□□ 0.89
SNCA-203ENST00000394986 TRIM7Q9C029 511 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 TKTL2Q9H0I9 626 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 THAP2Q9H0W7 228 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 CHRDQ9H2X0 955 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 DEF6Q9H4E7 631 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 WDCPQ9H6R7 721 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 PARVAQ9NVD7 372 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 RAPGEFL1Q9UHV5 662 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 SNX10Q9Y5X0 201 aa20.64■□□□□ 0.89
SNCA-203ENST00000394986 MYOFQ9NZM1 2061 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.63■□□□□ 0.89
SNCA-203ENST00000394986 CCP110O43303 1012 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 TBL1XO60907 577 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 RNF40O75150 1001 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 PAGE1O75459 146 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 F9P00740 461 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 PTPN9P43378 593 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 RPS24P62847 133 aaKnown RBP20.63■□□□□ 0.89
SNCA-203ENST00000394986 MTAPQ13126 283 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
SNCA-203ENST00000394986 GRAMD4Q6IC98 578 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 SND1Q7KZF4 910 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNCA-203ENST00000394986 LGI2Q8N0V4 545 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 CFAP52Q8N1V2 620 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 FAM172AQ8WUF8 416 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 EXOC4Q96A65 974 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 NHEJ1Q9H9Q4 299 aaPredicted RBP20.63■□□□□ 0.89
SNCA-203ENST00000394986 ARHGEF38Q9NXL2 777 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 STIM2Q9P246 746 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 SLC12A6Q9UHW9 1150 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 HS3ST4Q9Y661 456 aa20.63■□□□□ 0.89
SNCA-203ENST00000394986 SSU72P8A0A1W2PR75 194 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 K7EQS6 105 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 ENDOD1O94919 500 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 APODP05090 189 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 CISD3P0C7P0 127 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 GRIA2P42262 883 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 DGKGP49619 791 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 SLC18A3Q16572 532 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 BRMS1LQ5PSV4 323 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 TERB1Q8NA31 727 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 ARHGEF26Q96DR7 871 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 TRIM11Q96F44 468 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 PRMT1Q99873 361 aaKnown RBP20.62■□□□□ 0.89
SNCA-203ENST00000394986 DDX50Q9BQ39 737 aaKnown RBP20.62■□□□□ 0.89
SNCA-203ENST00000394986 SPTLC3Q9NUV7 552 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 POLR3BQ9NW08 1133 aaPredicted RBP20.62■□□□□ 0.89
SNCA-203ENST00000394986 SPATA6Q9NWH7 488 aaPredicted RBP20.62■□□□□ 0.89
SNCA-203ENST00000394986 C2orf42Q9NWW7 574 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 ZNF318Q5VUA4 2279 aa20.62■□□□□ 0.89
SNCA-203ENST00000394986 ANKRD62A6NC57 917 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 AKR1B10O60218 316 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 MYBL1P10243 752 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 ZNF143P52747 638 aaPredicted RBP20.61■□□□□ 0.89
SNCA-203ENST00000394986 HDAC4P56524 1084 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 C14orf80Q86SX3 495 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 CIR1Q86X95 450 aaPredicted RBP20.61■□□□□ 0.89
SNCA-203ENST00000394986 HJURPQ8NCD3 748 aaPredicted RBP20.61■□□□□ 0.89
SNCA-203ENST00000394986 WFDC5Q8TCV5 224 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 CENPIQ92674 756 aaPredicted RBP20.61■□□□□ 0.89
SNCA-203ENST00000394986 PACSIN1Q9BY11 444 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 SIK2Q9H0K1 926 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 ZDHHC4Q9NPG8 344 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 FBXO10Q9UK96 956 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 TBC1D3BA6NDS4 549 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 F5H5T6 163 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 IRAK1P51617 712 aa20.61■□□□□ 0.89
SNCA-203ENST00000394986 ZNF252P-AS1Q0IIN9 211 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms