RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 SLC6A3Q01959 620 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 OVOS1Q6IE37 1185 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 CLEC20AQ6ZU45 233 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 NLRP9Q7RTR0 991 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 TMEM199Q8N511 208 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 OR10T2Q8NGX3 314 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 STK32AQ8WU08 396 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 VPS11Q9H270 941 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 TMEM30AQ9NV96 361 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 KANSL3Q9P2N6 904 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 LRRC42Q9Y546 428 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 NPR3P17342 541 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 PTPN4P29074 926 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 RFC2P35250 354 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 HP1BP3Q5SSJ5 553 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 BBS12Q6ZW61 710 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 PYROXD1Q8WU10 500 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 CPT1BQ92523 772 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 BADQ92934 168 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 KHSRPQ92945 711 aaKnown RBP eCLIP20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 ABHD8Q96I13 439 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 SUSD3Q96L08 255 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 B3GALT6Q96L58 329 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 ELAC1Q9H777 363 aaKnown RBP20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 NRDE2Q9H7Z3 1164 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 TMLHEQ9NVH6 421 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 PRKAG2Q9UGJ0 569 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 CDH9Q9ULB4 789 aa20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-203ENST00000392334 TBKBP1A7MCY6 615 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 TADA2AO75478 443 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 AP1G2O75843 785 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 FAM163BP0C2L3 166 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 OR4Q2P0C623 313 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 TROVE2P10155 538 aaKnown RBP eCLIP20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 IL1R2P27930 398 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 ADIGQ0VDE8 80 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 C16orf59Q7L2K0 433 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 LRRTM3Q86VH5 581 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 LONP2Q86WA8 852 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 NKX1-2Q9UD57 310 aaPredicted RBP20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 ZFP69BQ9UJL9 534 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 C2CD4BA6NLJ0 364 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 NRP1O14786 923 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 IFNB1P01574 187 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 FAM200BP0CF97 657 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 TPBGLP0DKB5 382 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 GPD1P21695 349 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 PCSK1P29120 753 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 SLC25A11Q02978 314 aaKnown RBP20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 CAPN12Q6ZSI9 719 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 OTOP2Q7RTS6 562 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 FAM35AQ86V20 835 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 BANPQ8N9N5 519 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 FNIP1Q8TF40 1166 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 MYLPFQ96A32 169 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 HAUS1Q96CS2 278 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 PAFAH2Q99487 392 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 TUBB6Q9BUF5 446 aa20.53■□□□□ 0.88
CSNK1D-203ENST00000392334 LTBP2Q14767 1821 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 XPO1O14980 1071 aaKnown RBP20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 CYP11A1P05108 521 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 KRT7P08729 469 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 TFE3P19532 575 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 PLCB3Q01970 1234 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 YWHAHQ04917 246 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 BLMHQ13867 455 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 CTC1Q2NKJ3 1217 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 ANKMY2Q8IV38 441 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 TEX9Q8N6V9 391 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 ACTL9Q8TC94 416 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 DCAKDQ8WVC6 231 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 SMOQ99835 787 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 ACBD6Q9BR61 282 aa20.52■□□□□ 0.88
CSNK1D-203ENST00000392334 FNDC1Q4ZHG4 1894 aaPredicted RBP20.52■□□□□ 0.87
CSNK1D-203ENST00000392334 CCDC85CA6NKD9 419 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 SMNDC1O75940 238 aaKnown RBP eCLIP20.51■□□□□ 0.874e-6■■■■□ 24.8
CSNK1D-203ENST00000392334 LMNAP02545 664 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 BDNFP23560 247 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 ZNF143P52747 638 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 DEFB103AP81534 67 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 OTUD4Q01804 1114 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 CBLBQ13191 982 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 CCDC14Q49A88 953 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 TAF1BQ53T94 588 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 FNBP1LQ5T0N5 605 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 ANKRD22Q5VYY1 191 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 NAF1Q96HR8 494 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 WDR83Q9BRX9 315 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 RNF8O76064 485 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 ADRA1DP25100 572 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 MIPP30301 263 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 SSTR1P30872 391 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 RPL22P35268 128 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 TAF11Q15544 211 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 MSS51Q4VC12 460 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 INTS6LQ5JSJ4 861 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 FAM117BQ6P1L5 589 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 GPRIN1Q7Z2K8 1008 aa20.51■□□□□ 0.87
CSNK1D-203ENST00000392334 CLNKQ7Z7G1 428 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms