RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 RGS18Q9NS28 235 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 MTSS1O43312 755 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 KRT4P19013 534 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 TAC1P20366 129 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 PITX1P78337 314 aaPredicted RBP23.84■■□□□ 1.41
VPS16-201ENST00000380443 PARP6Q2NL67 630 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 EBNA1BP2Q99848 306 aaKnown RBP23.84■■□□□ 1.41
VPS16-201ENST00000380443 PAAF1Q9BRP4 392 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 FGFR1OP2Q9NVK5 253 aa23.84■■□□□ 1.41
VPS16-201ENST00000380443 CENPFP49454 3210 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 ANKRD65E5RJM6 399 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 MFSD11O43934 449 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 SPAG7O75391 227 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 MAP3K6O95382 1288 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 MT-ND3P03897 115 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 MYCNP04198 464 aaPredicted RBP23.83■■□□□ 1.41
VPS16-201ENST00000380443 CXCR3P49682 368 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 ACTN3Q08043 901 aaPredicted RBP23.83■■□□□ 1.41
VPS16-201ENST00000380443 MTFR1Q15390 333 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 PDK4Q16654 411 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 KBTBD12Q3ZCT8 623 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 HHATQ5VTY9 493 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 OVOS1Q6IE37 1185 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 C4orf50Q6ZRC1 276 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 LRRC6Q86X45 466 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 SIGLEC10Q96LC7 697 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 GLT1D1Q96MS3 346 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 PCDHB8Q9UN66 801 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 TTLL3Q9Y4R7 772 aa23.83■■□□□ 1.41
VPS16-201ENST00000380443 TDRD15B5MCY1 1934 aaKnown RBP23.83■■□□□ 1.4
VPS16-201ENST00000380443 COL4A4P53420 1690 aaPredicted RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 A0A1W2PPM1 405 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 CREB3O43889 395 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 APOEP02649 317 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 GSTA1P08263 222 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 VAV1P15498 845 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 MX2P20592 715 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 EFTUD2Q15029 972 aaKnown RBP eCLIP23.82■■□□□ 1.42e-6■■■□□ 14.6
VPS16-201ENST00000380443 SEPT7Q16181 437 aaKnown RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 FAXCQ5TGI0 409 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 TTC39BQ5VTQ0 682 aaPredicted RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 BHLHA9Q7RTU4 235 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 GPRIN1Q7Z2K8 1008 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 C4orf33Q8N1A6 199 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 BANPQ8N9N5 519 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 GSDMBQ8TAX9 411 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 NAT9Q9BTE0 207 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 COLEC11Q9BWP8 271 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 OSBPL7Q9BZF2 842 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 MLXIPLQ9NP71 852 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 DDIT4Q9NX09 232 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 IGSF9Q9P2J2 1179 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 ARL2BPQ9Y2Y0 163 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 SYNJ2BP-COX16A0A087WUM0 186 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 AVILO75366 819 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 RPA3P35244 121 aaPredicted RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 TPI1P60174 286 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 LRRC8BQ6P9F7 803 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 SPATA21Q7Z572 469 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 GBP7Q8N8V2 638 aaPredicted RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 COLGALT1Q8NBJ5 622 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 MTBPQ96DY7 904 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 MRRFQ96E11 262 aaKnown RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 CFAP36Q96G28 342 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 P2RY11Q96G91 374 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 ZNF333Q96JL9 665 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 EPAS1Q99814 870 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 WDCPQ9H6R7 721 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 TRMT13Q9NUP7 481 aaKnown RBP23.82■■□□□ 1.4
VPS16-201ENST00000380443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.82■■□□□ 1.4
VPS16-201ENST00000380443 COX16Q9P0S2 106 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 KANSL3Q9P2N6 904 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 STARD13Q9Y3M8 1113 aa23.82■■□□□ 1.4
VPS16-201ENST00000380443 TMEM189-UBE2V1I3L0A0 370 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 KRT37O76014 449 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 C1QAP02745 245 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 INHAP05111 366 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 HTR7P34969 479 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 SERPINB6P35237 376 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 BRCC3P46736 316 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 LIG3P49916 1009 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 CACNA2D1P54289 1103 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 SLC18A2Q05940 514 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 AP1B1Q10567 949 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 GLB1LQ6UWU2 654 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 SLC24A5Q71RS6 500 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 ZNF534Q76KX8 674 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 MICALL1Q8N3F8 863 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 TMEM30AQ9NV96 361 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 PCDHA11Q9Y5I1 949 aa23.81■■□□□ 1.4
VPS16-201ENST00000380443 RNF103O00237 685 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 COL6A1P12109 1028 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 FAM189BP81408 668 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 TRPM8Q7Z2W7 1104 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 AGGF1Q8N302 714 aaeCLIP23.8■■□□□ 1.4
VPS16-201ENST00000380443 LGMNQ99538 433 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 PAIP2Q9BPZ3 127 aaKnown RBP23.8■■□□□ 1.4
VPS16-201ENST00000380443 PITPNM3Q9BZ71 974 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 OSBPL2Q9H1P3 480 aa23.8■■□□□ 1.4
VPS16-201ENST00000380443 VPS11Q9H270 941 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms