RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 UBXN1Q04323 297 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 C10orf76Q5T2E6 689 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 MPP7Q5T2T1 576 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 FRMD1Q8N878 549 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 TXNDC5Q8NBS9 432 aaKnown RBP17.68■□□□□ 0.42
RER1-202ENST00000378512 LOXL4Q96JB6 756 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 CD248Q9HCU0 757 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 RTN4Q9NQC3 1192 aaKnown RBP17.68■□□□□ 0.42
RER1-202ENST00000378512 CLEC4EQ9ULY5 219 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 CEP83Q9Y592 693 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 CKAP5Q14008 2032 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 KLF8O95600 359 aaPredicted RBP17.67■□□□□ 0.42
RER1-202ENST00000378512 TRUB2O95900 331 aaKnown RBP17.67■□□□□ 0.42
RER1-202ENST00000378512 CYBBP04839 570 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 SLC6A4P31645 630 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 NOMO3P69849 1222 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 PITX1P78337 314 aaPredicted RBP17.67■□□□□ 0.42
RER1-202ENST00000378512 SLC6A3Q01959 620 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 ENPP2Q13822 863 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 PIK3R6Q5UE93 754 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 NADSYN1Q6IA69 706 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 KIAA0907Q7Z7F0 614 aaPredicted RBP17.67■□□□□ 0.42
RER1-202ENST00000378512 ZNF513Q8N8E2 541 aaPredicted RBP17.67■□□□□ 0.42
RER1-202ENST00000378512 C12orf50Q8NA57 414 aaPredicted RBP17.67■□□□□ 0.42
RER1-202ENST00000378512 BHMTQ93088 406 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 CNTNAP3BQ96NU0 1288 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 CNTNAP3Q9BZ76 1288 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 NLRC4Q9NPP4 1024 aa17.67■□□□□ 0.42
RER1-202ENST00000378512 SYCE3A1L190 88 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 CAPN9O14815 690 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 GFPT2O94808 682 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 CYP1A1P04798 512 aaPredicted RBP17.66■□□□□ 0.42
RER1-202ENST00000378512 MMEP08473 750 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 CHRNB2P17787 502 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 GBP1P32455 592 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 SLC11A2P49281 568 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 CDR2Q01850 454 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 CREB5Q02930 508 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 EOGTQ5NDL2 527 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 TRMT11Q7Z4G4 463 aaKnown RBP17.66■□□□□ 0.42
RER1-202ENST00000378512 DEFB106AQ8N104 65 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.66■□□□□ 0.423e-6■■■□□ 15.4
RER1-202ENST00000378512 NEK11Q8NG66 645 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 ADAM32Q8TC27 787 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 IPO4Q8TEX9 1081 aaKnown RBP17.66■□□□□ 0.42
RER1-202ENST00000378512 DDI1Q8WTU0 396 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 RLN3Q8WXF3 142 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 NT5C3BQ969T7 300 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 GABRG3Q99928 467 aa17.66■□□□□ 0.42
RER1-202ENST00000378512 KCNU1A8MYU2 1149 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 TEX33O43247 280 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 DAB1O75553 588 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 NTSR1P30989 418 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 STAT1P42224 750 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 SGSHP51688 502 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 FMO1Q01740 532 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 GEN1Q17RS7 908 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 DCAF6Q58WW2 860 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 EGFLAMQ63HQ2 1017 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 OR6B2Q6IFH4 312 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 XYLT1Q86Y38 959 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 OLIG1Q8TAK6 271 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 SLC20A1Q8WUM9 679 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 C18orf8Q96DM3 657 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 ERLEC1Q96DZ1 483 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 TMA16Q96EY4 203 aaKnown RBP17.65■□□□□ 0.42
RER1-202ENST00000378512 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.65■□□□□ 0.429e-8■■■□□ 14.6
RER1-202ENST00000378512 ABCA7Q8IZY2 2146 aa17.65■□□□□ 0.42
RER1-202ENST00000378512 A0A1B0GTH6 734 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 A0A1W2PQF6 199 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 TM4SF5O14894 197 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 NPC1O15118 1278 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 ADRB1P08588 477 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 NOS2P35228 1153 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 EIF4HQ15056 248 aaKnown RBP17.64■□□□□ 0.42
RER1-202ENST00000378512 ELF2Q15723 593 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 STPG1Q5TH74 334 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 OTUD1Q5VV17 481 aaPredicted RBP17.64■□□□□ 0.42
RER1-202ENST00000378512 TAF3Q5VWG9 929 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 TMEM215Q68D42 235 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 ARCQ7LC44 396 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 ANKS1BQ7Z6G8 1248 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 PGAP3Q96FM1 320 aaPredicted RBP17.64■□□□□ 0.42
RER1-202ENST00000378512 LMLNQ96KR4 655 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 BTN2A3PQ96KV6 586 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 PRICKLE1Q96MT3 831 aaPredicted RBP17.64■□□□□ 0.42
RER1-202ENST00000378512 SPAG5Q96R06 1193 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 ACOX2Q99424 681 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 NPY6RQ99463 290 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 ADAM33Q9BZ11 813 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 PCDHGA5Q9Y5G8 931 aa17.64■□□□□ 0.42
RER1-202ENST00000378512 TNRC6BQ9UPQ9 1833 aaKnown RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 GOLGA6L7A0A1B0GV03 622 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 BCLAF3A2AJT9 711 aaKnown RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 PATE3B3GLJ2 98 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 TSPAN3O60637 253 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 CAVIN2O95810 425 aa17.64■□□□□ 0.41
RER1-202ENST00000378512 UNGP13051 313 aaPredicted RBP17.64■□□□□ 0.41
RER1-202ENST00000378512 HLA-FP30511 346 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms