RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 KCNN1Q92952 543 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 ZFRQ96KR1 1074 aaKnown RBP16.98■□□□□ 0.31
TRIM39-201ENST00000376656 LRGUKQ96M69 825 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 PHF12Q96QT6 1004 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 RTKNQ9BST9 563 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 COPG2Q9UBF2 871 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 RAB26Q9ULW5 256 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 NR2E3Q9Y5X4 410 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 KRT19P08727 400 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 HOXC6P09630 235 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 GRK2P25098 689 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 CNTFP26441 200 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 HSPA1LP34931 641 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 HDAC4P56524 1084 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 OSTNP61366 133 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 CASC4Q6P4E1 433 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 AHI1Q8N157 1196 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 MAPK15Q8TD08 544 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 ACMSDQ8TDX5 336 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 CLMNQ96JQ2 1002 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 TMEM134Q9H6X4 195 aa16.98■□□□□ 0.31
TRIM39-201ENST00000376656 COPS7BQ9H9Q2 264 aaPredicted RBP16.98■□□□□ 0.31
TRIM39-201ENST00000376656 C2CD4BA6NLJ0 364 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 SPDYE16A6NNV3 312 aaPredicted RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 TNFAIP8O95379 198 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ACAT1P24752 427 aaKnown RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 SLC5A2P31639 672 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 HARS2P49590 506 aaKnown RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 NUDT2P50583 147 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 CDKL1Q00532 357 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 SP2Q02086 613 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ADGRE1Q14246 886 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 POTEAQ6S8J7 498 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 RBM12BQ8IXT5 1001 aaKnown RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ZNF781Q8N8C0 355 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 MRPL1Q9BYD6 325 aaKnown RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ZNF696Q9H7X3 374 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 PCDH18Q9HCL0 1135 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 STK39Q9UEW8 545 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 CIDEBQ9UHD4 219 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 GNEQ9Y223 722 aaKnown RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 SH3BP1Q9Y3L3 701 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 A0A1B0GTW7 788 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 TGM2P21980 687 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 SERPINB5P36952 375 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 GALK1P51570 392 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 GRM1Q13255 1194 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 PPP6R3Q5H9R7 873 aaPredicted RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 RARS2Q5T160 578 aaKnown RBP16.97■□□□□ 0.31
TRIM39-201ENST00000376656 LILRA2Q8N149 483 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 AGR3Q8TD06 166 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 GAB3Q8WWW8 586 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ATP2A3Q93084 1043 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 CATSPER2Q96P56 530 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ELOVL4Q9GZR5 314 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 ZNF302Q9NR11 478 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 DCDC2Q9UHG0 476 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 RIMS3Q9UJD0 308 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 USP21Q9UK80 565 aa16.97■□□□□ 0.31
TRIM39-201ENST00000376656 PRDX6P30041 224 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 THOP1P52888 689 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 NIPAL4Q0D2K0 466 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 PPM1LQ5SGD2 360 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 GALNT4Q8N4A0 578 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 OR52B2Q96RD2 323 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 PLK2Q9NYY3 685 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 RPS6KL1Q9Y6S9 549 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 H3BSA7 217 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 CCDC166P0CW27 439 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 XRCC1P18887 633 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 TCF7P36402 384 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 GPD2P43304 727 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 ATXN3P54252 364 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 EMP3P54852 163 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 PTPN11Q06124 597 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 APOFQ13790 326 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 FSCBQ5H9T9 825 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 SLC9A4Q6AI14 798 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 EPGNQ6UW88 154 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 TICAM1Q8IUC6 712 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 MAP7D3Q8IWC1 876 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 CEP70Q8NHQ1 597 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 PGBD4Q96DM1 585 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 CPSF3Q9UKF6 684 aaKnown RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 MSCO60682 206 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 MMP10P09238 476 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 TPSB2P20231 275 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 SLC10A2Q12908 348 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 CYLC2Q14093 348 aaPredicted RBP16.96■□□□□ 0.31
TRIM39-201ENST00000376656 TPSAB1Q15661 275 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 HSP90AA5PQ58FG0 334 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 OR6B2Q6IFH4 312 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 ZPBP2Q6X784 338 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 TNS4Q8IZW8 715 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 LPAR1Q92633 364 aa16.96■□□□□ 0.31
TRIM39-201ENST00000376656 ABTB1Q969K4 478 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms