RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 SUSD6Q92537 303 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 RNF25Q96BH1 459 aaPredicted RBP23.73■■□□□ 1.39
HLA-C-202ENST00000376237 ACSF2Q96CM8 615 aaPredicted RBP23.73■■□□□ 1.39
HLA-C-202ENST00000376237 EPAS1Q99814 870 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 DDX50Q9BQ39 737 aaKnown RBP23.73■■□□□ 1.39
HLA-C-202ENST00000376237 ZNF670Q9BS34 389 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 TMPRSS4Q9NRS4 437 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 EFR3BQ9Y2G0 817 aa23.73■■□□□ 1.39
HLA-C-202ENST00000376237 E2F8A0AVK6 867 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 URI1O94763 535 aaPredicted RBP23.72■■□□□ 1.39
HLA-C-202ENST00000376237 KLKB1P03952 638 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 PTPN7P35236 360 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 HCAR3P49019 387 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 SEMA3BQ13214 749 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 CLUL1Q15846 466 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 TFDP3Q5H9I0 405 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 PPP6R3Q5H9R7 873 aaPredicted RBP23.72■■□□□ 1.39
HLA-C-202ENST00000376237 DENND1CQ8IV53 801 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 SMARCD2Q92925 531 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 ASB16Q96NS5 453 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 CALN1Q9BXU9 219 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 SIK2Q9H0K1 926 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 TRPV4Q9HBA0 871 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 KLHL11Q9NVR0 708 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 CFAP97Q9P2B7 532 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 RNF14Q9UBS8 474 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 STOML2Q9UJZ1 356 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 HS3ST4Q9Y661 456 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 C2orf16Q68DN1 1984 aa23.72■■□□□ 1.39
HLA-C-202ENST00000376237 DOCK6Q96HP0 2047 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 C3orf70A6NLC5 250 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 PI4K2BG5E9Z4 385 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 H3BQ06 376 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 KCNA5P22460 613 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 ZNF211Q13398 564 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 DPYSL3Q14195 570 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 PPP2R5EQ16537 467 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 TAZQ16635 292 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 MS4A13Q5J8X5 152 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 ADGRF1Q5T601 910 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 MFSD7Q6UXD7 560 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 LRRC31Q6UY01 552 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 SPOCD1Q6ZMY3 1216 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 Q6ZNB5 142 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 HLA-CQ95604 372 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 KCTD15Q96SI1 283 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 SMG9Q9H0W8 520 aaKnown RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 POMKQ9H5K3 350 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 PRDM16Q9HAZ2 1276 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 OBP2AQ9NY56 170 aa23.71■■□□□ 1.39
HLA-C-202ENST00000376237 AGO1Q9UL18 857 aaKnown RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 USP15Q9Y4E8 981 aaPredicted RBP23.71■■□□□ 1.39
HLA-C-202ENST00000376237 H3BRJ5 948 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 CEP104O60308 925 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 GREM1O60565 184 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 CDKN2BP42772 138 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 SMAD4Q13485 552 aaKnown RBP23.7■■□□□ 1.38
HLA-C-202ENST00000376237 PIK3R6Q5UE93 754 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 POTEHQ6S545 545 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 PYROXD2Q8N2H3 581 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 RASGEF1CQ8N431 466 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 TSC1Q92574 1164 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 E2F7Q96AV8 911 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 XPO7Q9UIA9 1087 aaKnown RBP23.7■■□□□ 1.38
HLA-C-202ENST00000376237 TTC7AQ9ULT0 858 aaPredicted RBP23.7■■□□□ 1.38
HLA-C-202ENST00000376237 CCL26Q9Y258 94 aa23.7■■□□□ 1.38
HLA-C-202ENST00000376237 SRGAP2O75044 1071 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 PRAMEF12O95522 483 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 IL4RP24394 825 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 FAM78AQ5JUQ0 283 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 COG1Q8WTW3 980 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 PPM1EQ8WY54 764 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 NAP1L3Q99457 506 aaPredicted RBP23.69■■□□□ 1.38
HLA-C-202ENST00000376237 PRMT1Q99873 361 aaKnown RBP23.69■■□□□ 1.38
HLA-C-202ENST00000376237 MAK16Q9BXY0 300 aaKnown RBP23.69■■□□□ 1.38
HLA-C-202ENST00000376237 MAGEB5Q9BZ81 275 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 OSBPL8Q9BZF1 889 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 CWC15Q9P013 229 aaKnown RBP23.69■■□□□ 1.38
HLA-C-202ENST00000376237 STIM2Q9P246 746 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 CDC23Q9UJX2 597 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 FAM72CH0Y354 149 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 EEF2KO00418 725 aaKnown RBP23.69■■□□□ 1.38
HLA-C-202ENST00000376237 CREB3O43889 395 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 CD48P09326 243 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 USP4Q13107 963 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 AUHQ13825 339 aaKnown RBP23.69■■□□□ 1.38
HLA-C-202ENST00000376237 ZNF77Q15935 545 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 FAM72AQ5TYM5 149 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 FAM72DQ6L9T8 149 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 OTOP3Q7RTS5 596 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 CHSY1Q86X52 802 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 FAM72BQ86X60 149 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 ACTRT1Q8TDG2 376 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 WBP2Q969T9 261 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 FAF2Q96CS3 445 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 CSPG4P5Q96PW8 444 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 RNF157Q96PX1 679 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 TBC1D14Q9P2M4 693 aa23.69■■□□□ 1.38
HLA-C-202ENST00000376237 hCG_1818297A0A087WSY0 165 aa23.68■■□□□ 1.38
HLA-C-202ENST00000376237 LRIG2O94898 1065 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms