RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 DCUN1D1Q96GG9 259 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 TMEM216Q9P0N5 145 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 PCDHGA4Q9Y5G9 962 aa14.1□□□□□ -0.15
USP49-201ENST00000373006 GOLGA8QA0A0J9YX86 632 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 GOLGA8OA6NCC3 632 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 GOLGA8NF8WBI6 632 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 GPD1P21695 349 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 SERPINB5P36952 375 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 RGS7P49802 495 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 FSTL1Q12841 308 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 CNGA3Q16281 694 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 CES3Q6UWW8 571 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 TMEM192Q8IY95 271 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 RNF168Q8IYW5 571 aaPredicted RBP14.09□□□□□ -0.15
USP49-201ENST00000373006 LENG1Q96BZ8 264 aaPredicted RBP14.09□□□□□ -0.15
USP49-201ENST00000373006 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
USP49-201ENST00000373006 PRICKLE1Q96MT3 831 aaPredicted RBP14.09□□□□□ -0.15
USP49-201ENST00000373006 PEX10O60683 326 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 DNAJA2O60884 412 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 HOXC6P09630 235 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 COX4I1P13073 169 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 SESN2P58004 480 aaPredicted RBP14.09□□□□□ -0.15
USP49-201ENST00000373006 GBE1Q04446 702 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 ANKRD23Q86SG2 305 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 LPAR1Q92633 364 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 MCRS1Q96EZ8 462 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 ELOVL4Q9GZR5 314 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 PCDHA11Q9Y5I1 949 aa14.09□□□□□ -0.15
USP49-201ENST00000373006 BOLA2-SMG1P6H3BVE0 249 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 TBC1D12O60347 775 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 MSCO60682 206 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 SERPINE1P05121 402 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 RPL5P46777 297 aaKnown RBP14.08□□□□□ -0.15
USP49-201ENST00000373006 AP3M2P53677 418 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 MRPS22P82650 360 aaKnown RBP14.08□□□□□ -0.15
USP49-201ENST00000373006 PTPN11Q06124 597 aaPredicted RBP14.08□□□□□ -0.15
USP49-201ENST00000373006 SNAPC2Q13487 334 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 TMEM132AQ24JP5 1023 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 GALNT4Q8N4A0 578 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 ZFP28Q8NHY6 868 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 LENG8Q96PV6 779 aaPredicted RBP14.08□□□□□ -0.15
USP49-201ENST00000373006 PRPF18Q99633 342 aaKnown RBP14.08□□□□□ -0.15
USP49-201ENST00000373006 CNPY3Q9BT09 278 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 COG4Q9H9E3 785 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 XPNPEP3Q9NQH7 507 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 ARHGAP26Q9UNA1 814 aa14.08□□□□□ -0.15
USP49-201ENST00000373006 COL2A1P02458 1487 aaPredicted RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 ZNF195O14628 629 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 TRPA1O75762 1119 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 DGKIO75912 1065 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 EGFRP00533 1210 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 RALBP11234 206 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 RGS2P41220 211 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 GPD2P43304 727 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 SERPINB9P50453 376 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 SLC9B1Q4ZJI4 515 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 ZNF667Q5HYK9 610 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 MIPOL1Q8TD10 442 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 TMCO1Q9UM00 188 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 WNT10BO00744 389 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 OGTO15294 1046 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 CFLARO15519 480 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 TPD52L2O43399 206 aaKnown RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 TNNC2P02585 160 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 PIM1P11309 404 aaPredicted RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 MTTPP55157 894 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 XIAPP98170 497 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 SLC10A2Q12908 348 aaPredicted RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 CMC1Q7Z7K0 106 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 ZBTB46Q86UZ6 589 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 PQLC1Q8N2U9 271 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 LRRC71Q8N4P6 559 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 ZNF781Q8N8C0 355 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 ATP2A3Q93084 1043 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 FRMD8Q9BZ67 464 aaPredicted RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 COPS7BQ9H9Q2 264 aaPredicted RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 MOCS1Q9NZB8 636 aa14.08□□□□□ -0.16
USP49-201ENST00000373006 CPSF3Q9UKF6 684 aaKnown RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
USP49-201ENST00000373006 C2CD4BA6NLJ0 364 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 PRKCGP05129 697 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 SRGAP2BP0DMP2 458 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 NUDT2P50583 147 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 ABCE1P61221 599 aaKnown RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 PPM1LQ5SGD2 360 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 C6orf52Q5T4I8 152 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 OGFRL1Q5TC84 451 aaPredicted RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 FAM183BPQ6ZVS7 135 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 RNF149Q8NC42 400 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 ADAM32Q8TC27 787 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 MAPK15Q8TD08 544 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 APBB2Q92870 758 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 ACO2Q99798 780 aaKnown RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 MRPL4Q9BYD3 311 aaKnown RBP14.07□□□□□ -0.16
USP49-201ENST00000373006 CEP41Q9BYV8 373 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 PCDH18Q9HCL0 1135 aa14.07□□□□□ -0.16
USP49-201ENST00000373006 NEMP1O14524 444 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms